Lytechinus variegatus (green sea urchin): 121411097
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Entry
121411097 CDS
T11173
Name
(RefSeq) fibropellin-1-like
KO
K02599
Notch 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121411097
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Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
DSL
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
121411097
NCBI-ProteinID:
XP_041459554
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All DBs
Position
3:43395717..43413542
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AA seq
1415 aa
AA seq
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MDCNIIKWLLTTFLVQTMLQREVGGVVKVLMKLKRYQNPGHHELDDDCCDPQPWLLWDPC
NDCDNEFYLCFDTISSDLDFHTCHYGSFQTERLFVDDDDFYFPPALRTPQNTFIPNPFLI
NITNWQNGFRTKIRVEDYDPLNSPDLIDEIGFNFMGSEYTPSPSLQSISEWKEVVLDHGN
GHSIITVQLKIYCEEHYYNTAEGCSVYCLGRDDALGHYDCHDVTGSKVCHPGYTGDNCNQ
EINECGSNPCKNDGVCRDLKDAYDCICQDGSSGTNCETDVDECASAPCQNGATCTALGTA
LNFYQCTCLTGYGGINCETDIDECASNPCENGATCNNRIGFYECECLAGTTGSRCEIDIN
ECLSQPCQNGGTCTTSPAQFNAYSCQCQEGFLGLDCDTIMDECISNPCQNGGNCTDLLNG
FICQCLPGSDGKTCEEDIDECLSFPCQHSGTCVTQAGVLNSYECTCPNGFEGSNCEVEIN
ECASNPCIRGTCIDLAASFRCDCPRGSTGLRCELDINECESDPCENGGLCVNPTEELNAY
QCNCIEGFTGKNCQNNQDDCEMLPCQNGGTCTDLVNSYRCECPAGTSGADCDIDVDECNS
HPCLNGGTCSTSPNELNYYQCICPVGFIGPNCEGHVCDNNPCALGSTCESFGGQSSCLCQ
PGYQGETCHHDINECESNPCKNGATCRNEVNSFACVCANDFSGNDCSVDTNLCRSYPCLN
SGTCINLDNAFSCECIDGYTGQECETNANECESSPCRNGGSCEDLVDGYTCTCNGGYHGT
DCEILTDNCASHPCHNGGTCANGLGTYACKCPTGFRGTDCEIQIDECASSPCRNGATCSD
VIAGYLCHCTIGFSGRHCEINDDNCVFNHCHYPSTCVDGTNEYTCSCAEGYMGTYCETNV
DDCENNDCKNGATCIDQINSYICSCALGYEGDECEIDINECFSNPCQNSAECKDMVYGYS
CACLPGFTGINCETDIDECKSNPCKHGGTCFDRTDGFICSCSQGFKGPLCNLGPNDCTYN
NCVNNATCFEDFPNYRCQCPSGYNGILCHTDVDECTQFENVCLPGSECINTIGGYQCEEV
PTEEVPPSGICQNQMCRNGGTCSLYGNTYVCDCPEDFRGDLCEVPTTFDCAYSLCQNGGT
CVKTIESDGRQTSKCDCEQNYIGDTCQTNLLGTFYSIELEDHIQNFDGLTNRLSNLLGIA
LNRSNAIITVILYNSTYHTAYTGQNYTSIGFYAFIEDDIVADVNISRGLSAMSIESQDAI
IHPFKIFVLRNKEERGGPAGGMQSWIIGLIVVLVIIVLVLVILWAAYVRRVRIRRKMAVP
DSVAGSEGYTRSVSVTDSMVAAMGAEADQHRLVRPSITDQPVFDNPVYEEVRESAGGAHG
YSGKETEDSVVLPFPRRAVSNVYHGVNDGTVRHQE
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaacataattaaatggctgctgacaacgttcttggtgcaaactatgcttcag
cgagaggtgggaggagtggtgaaagttttgatgaaactaaaacgatatcagaatcctgga
caccacgaactcgacgatgactgttgtgaccctcaaccatggctattatgggacccttgc
aacgattgcgacaacgaattttatctttgttttgacacaatatcaagtgatctagatttc
cacacttgtcactacggaagttttcagacagaacgactgtttgtcgatgacgatgatttc
tactttcctccagctctgcgaacgccacaaaatacgtttatacctaatccgttcctgatc
aatattacaaactggcagaatggatttcgaactaaaatcagagtggaggactacgacccc
cttaacagtccagacctcatcgatgaaatcggttttaattttatgggttccgagtacaca
ccgtctcctagtcttcaaagcatatcagaatggaaggaagtggtgcttgatcatggaaat
ggtcattcgataataacagtgcaactcaaaatatattgcgaagagcactactataacaca
gccgaaggttgtagcgtctattgtttgggacgggatgatgctctggggcattacgactgt
catgacgtcacaggttcaaaggtttgccatccaggctatacaggtgataactgtaatcag
gaaatcaacgaatgtggttctaatccatgtaagaacgatggtgtctgccgagatctaaag
gacgcgtatgattgtatttgtcaagacggttcatcaggcacaaactgtgagaccgatgtg
gatgaatgtgcgagcgccccttgtcaaaatggagcaacatgtaccgcacttggcacagca
ctaaacttctaccaatgcacatgtttgacgggctatggtggcatcaactgtgaaacagat
attgatgaatgtgcctccaacccatgtgagaacggtgcaacgtgtaataaccgaattggt
ttctatgagtgtgaatgcttggcaggaaccacgggatctcgctgcgaaattgatatcaac
gaatgtctgagtcagccgtgccaaaatggcggcacgtgcactacctcgcctgctcagttc
aatgcctatagctgccaatgtcaagaaggttttctgggactggactgcgacaccatcatg
gacgagtgcatctctaatccatgccaaaatggcggaaactgcacagatttgctgaatggc
tttatatgtcagtgcctacctggaagcgatggtaaaacttgtgaagaggatattgatgaa
tgcctcagtttcccttgtcaacattctggaacctgcgtgacccaggcaggagtcttgaat
tcctatgaatgcacctgtccgaatggtttcgaaggtagtaattgcgaagtggagataaac
gaatgtgcatcaaatccgtgtataagaggtacttgcatagacttggcagcctcctttcga
tgcgattgccctcggggaagcactggtcttcgttgtgaacttgatatcaatgagtgtgaa
agcgacccttgcgaaaatggaggattgtgcgttaatccaactgaagaactaaatgcctac
caatgcaactgtatagaagggtttaccggcaagaattgtcaaaacaaccaagatgattgt
gaaatgctaccctgtcaaaacggaggaacatgtactgatctcgtcaattcatatcgttgc
gaatgtcctgctggaactagcggcgcagattgtgacattgatgtcgacgagtgcaattcc
catccatgtttaaatggtggcacctgctcaacatcaccaaacgaactaaactattatcag
tgcatttgtcccgttggttttattggtccaaactgcgagggacatgtatgtgacaacaat
ccctgtgctcttggttcaacttgcgagtcttttggaggacagtcgtcatgcttatgccaa
ccgggataccaaggtgaaacgtgccatcatgacatcaatgaatgtgaaagtaacccttgc
aaaaatggcgcaacatgtaggaatgaagtgaactcatttgcttgtgtctgtgccaatgat
ttcagcggtaatgactgctcagttgatacgaatctttgtcgctcttacccatgtttgaac
tcaggtacctgtatcaatctggacaatgctttctcctgtgagtgcattgatggatacact
ggacaagaatgtgaaactaatgccaatgagtgtgaaagtagcccttgtagaaatggtggt
tcatgcgaagatttagttgacgggtacacgtgtacatgtaacggaggataccatggaaca
gattgtgaaatattgacggataattgtgccagccacccctgccacaatggcgggacgtgt
gcgaatgggcttggaacgtacgcttgcaaatgcccgactggtttcagaggtacagattgc
gaaattcagattgacgaatgtgccagctctccgtgtaggaatggcgctacttgcagcgac
gtgatcgctggttacctctgtcactgcaccattggtttttctggaagacattgcgagatc
aacgatgataactgtgtttttaaccattgccattacccgtctacttgtgtggatggtacc
aacgaatatacttgctcttgcgcagaaggatacatggggacgtactgcgaaacaaacgta
gacgattgtgaaaataacgattgtaaaaatggtgcgacgtgtatcgaccaaattaatagt
tacatctgttcctgtgcacttggatacgagggtgatgaatgtgagattgatataaatgaa
tgcttcagcaacccttgtcaaaatagtgccgaatgtaaagatatggtatatggatacagt
tgtgcgtgcttgccagggtttacagggataaactgtgaaactgacatcgatgagtgtaag
agtaacccttgcaagcatggaggaacgtgctttgatagaacagatgggttcatttgctca
tgctctcaagggtttaagggaccattatgcaatctcggaccaaatgactgcacttacaac
aactgtgttaacaatgcaacttgctttgaggactttccaaactacaggtgtcagtgccct
tcaggatacaatggaattttatgtcatacagatgtggatgaatgtacccaattcgaaaat
gtgtgtctaccgggatcagaatgcatcaatactattgggggataccagtgtgaagaagta
ccaacagaagaagttcctccaagcggtatctgtcagaatcaaatgtgtagaaatggcgga
acttgctcgctctacggaaacacctacgtgtgcgactgtccagaggattttcgtggagat
ctgtgcgaggttccgacaacatttgactgcgcttattcactgtgtcaaaatggcggcacg
tgtgtaaaaaccatagagagtgacggcaggcaaacttcaaagtgtgactgtgaacaaaac
tacattggtgatacgtgtcaaacaaatttgcttggaactttctactccatcgagctggaa
gatcacatccagaatttcgacggtcttactaacagattaagcaatcttctcggtatcgca
ctcaacaggtctaatgccatcatcacggttatattatacaacagtacttatcatactgcc
tacacagggcaaaactacacatcgattgggttctacgctttcattgaagatgatatagta
gcggatgtgaacatttctagggggctctctgctatgagcattgaatcccaagatgccatt
attcatccttttaagatcttcgtcctcagaaataaagaggagcgtggtggaccggcaggt
gggatgcaatcgtggataatcggtctaattgtcgtgctggttatcatcgttctcgtttta
gtcatactatgggcagcatatgtcaggagagttcgtataagacggaagatggccgtaccc
gattccgtggcaggatcggaagggtatactcggagtgtatctgttactgactcaatggtt
gcggcaatgggtgcagaagcagatcaacataggttagtcagaccgtctataacagatcaa
cctgtgtttgataacccagtctatgaagaggttcgggaatctgcaggaggtgctcatgga
tactcagggaaagaaactgaagacagtgtcgtactacctttcccaagacgggctgtcagt
aacgtgtaccatggcgtaaacgatgggaccgtccgtcatcaggaatag
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