Lytechinus variegatus (green sea urchin): 121411116
Help
Entry
121411116 CDS
T11173
Name
(RefSeq) TBC1 domain family member 1-like isoform X1
KO
K17902
TBC1 domain family member 4
Organism
lvg
Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121411116
Membrane trafficking [BR:
lvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121411116
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121411116
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121411116
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PID
TBC1D_hel
DUF3350
PTB
Motif
Other DBs
NCBI-GeneID:
121411116
NCBI-ProteinID:
XP_041459578
LinkDB
All DBs
Position
1:complement(30843321..30919943)
Genome browser
AA seq
1399 aa
AA seq
DB search
MSFGVNKKDSSPSYYRHKDDQQLNLSPQSCSKLQVLDQGERRQSEPLPSAVTTQTTTSTM
AHVGQSSSNSLSVPSLPRHRANSGSKLERMVLQPIVYSLMYFGNVVLDRRITQPMLPWLI
DEKQRNGKLGHAIILQISSKGALGISERKGSIVFEHRLHNISRFSRGQDKKGFGYLWRPD
SNSNFRCFVFRACTDQHDQVVNDVVTSIRESDKENIPQSAQAEGITEAMDILKESNSSMF
EVLYCGKISVSHKRAPPTFIDESIEKFKEHEMMVQRRKRHFSSDDRQRSLSDASPKKSSS
LDIVEEDISKSHSDIDLPSVIQNIQNNNSNDSTLTIELPRKSSLPLTDNQVSRLQEDSPR
KNSVPLSGSQDVDSGATTGRTFGTLPRTDSFAKLMAAKESTHNRTMVFQIGRSTLTIISL
DKKSFALTKKFSEISFCSQGIKQPEYFGFICREKSSSLNYMCYVFKCQSESVVECIMNTL
RQAFNAALHHNKLHIICETCPMHKLHKFCQEVEGLNEELVWTRLQQQISALGVSSSNTFA
LQMRNCQVSSQQEQNHLAMMFLMKVCEQQQQNHTHISDEIKQKEVYKSDSNRPTTSKLES
LKKAKKSLTSSFENLLTRNKHRSSPGPDRLVLQNGREESPTGSPCATPPPLPNLVSPLTS
PSSTTSTTSTASSTTSGENTDIPEGRRPPPHPSHHQQPHPHNPNHPHHPTKQQSADAGQS
SVITPLPMRQRSRTLGDTPLTPTTPTSPRATFQFEGDQFKALRAPKQKPPLIRAMSVGGR
AHLLSPPGHSPRTPLMTSSTRTSWRQAIFNRVVTPMSESKAPPRFPDQSESVFEEEEEDN
EEKKESKSSPVVKRFTSRLAVRALWQRAIREQIILNRMDKENKRIQARQDAVIEKKMKLD
YEEITPCLVQVTKQWDRLIAIPNRANTIIPYDEINTLFKEGVPRTRRGDIWMMLSEQHLL
RMVPGASQIPESEPYTELLKQLTTHQHAILIDLGRTYPNHPYFSNALGRGQLSLFNLLKA
YSLLDAEVGYCQGLSFVAGILLMHMEEHDAFKMLTYLMFGWGFRRQYKPDMTALQIQMYQ
LSRLLHDFYHRLHNHLEQNEVAPSLYAAPWFLTLFASQFPLGFVSKVFDLIFLQGFEVIF
KVALVILGSHEELILQCDGFESIIDFIKNQLPSLGIVQMEKVINKAYHLDISKELHAYEV
EYHVIQEEMLPSPVQPKSMQRDIDQLEFSNRNLRRHNNELLEQLQSTHNTIQNQRSLLQT
KQTTENNLRLEIRNLNLERAALLDTIAKLQALIPENILSNASLDLIQPKRDYKCYDSESS
HQTIESAAGGGDNLSIDTDSIEDIDGEVAAINKVLALKEERSRNNSGGSIGSGQSASTNT
SEADIPCIMITDTKSISSL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgagttttggagtaaacaagaaggattcatcaccttcttattaccgtcataaagatgat
caacagttgaatcttagcccgcaaagctgttcgaaacttcaggtgttagatcagggggag
cgtcggcagagtgagcctttaccgtccgctgttacgacccagacgacaacaagcacaatg
gcacacgtcggtcagtcatcatcaaactctctttctgttccatctctgccgagacacagg
gccaattctggttctaaacttgagagaatggtattacagcccatcgtttacagtcttatg
tactttgggaatgtggtcttggatcgaagaatcacccagccgatgttgccatggttaatt
gatgagaaacagaggaatggtaaactggggcatgcaatcatcctccaaatatcttcaaag
ggtgcccttggtatttctgagagaaaggggtctatcgtcttcgagcatcgtctgcataac
atttctagattctcaagagggcaggataagaaaggttttgggtacctctggagacctgac
tcaaattctaacttcagatgttttgttttccgtgcttgcactgatcaacatgatcaagtg
gtgaatgacgttgtgacgagcatacgggaatcggacaaggagaacatcccacagtcagcc
caagcagaaggaatcactgaagccatggacatcctgaaagagtcaaactcctctatgttt
gaggttctttattgtggcaagatatccgttagtcacaaacgagcccctcctaccttcatc
gacgagtctatagaaaaatttaaagagcatgagatgatggtacagcggcgaaagcggcac
ttctcttctgatgatcgacagcgttccctatctgatgcatcaccaaagaagtcatcctct
cttgatatcgtggaagaagacatatcaaagtcgcactctgacattgatcttccatcagtt
atccagaacattcagaacaacaactcaaatgactccacacttaccattgaattaccacga
aagtcatccctacccttgacagacaatcaggtttcaagactccaggaagactcaccaagg
aaaaattctgtacccctgtcaggttctcaggatgtcgactcgggtgcgacaacaggtcgc
acatttggaacactcccacggacagactcttttgccaagttgatggcagccaaagaaagt
actcataatcgaacaatggtattccagataggaaggagtacactgacaatcatcagtctg
gacaagaaatcctttgcacttactaagaaattcagtgagatctccttctgctcccagggc
ataaaacaacctgagtactttgggtttatctgtcgggagaagtcttcaagcctcaactac
atgtgctatgttttcaagtgccagagtgaatccgtggttgaatgtataatgaacacattg
agacaggcttttaatgcagctcttcatcacaacaaactacacattatctgtgaaacctgc
cccatgcacaaactacacaagttctgccaagaagtagaaggtctaaatgaagagctggtt
tggactcgtcttcagcaacaaatatcagccttgggagtgtcttcttcaaatacatttgca
ctgcagatgagaaattgtcaagtttcaagccagcaggagcagaaccaccttgccatgatg
tttctaatgaaagtgtgtgagcaacaacaacagaaccatactcatattagtgatgaaatc
aaacaaaaggaagtgtacaagtcagattccaatagaccaaccacatccaagctggaatct
ttgaagaaagccaagaagtctctgactagttcctttgagaacctcctaactagaaacaaa
catcgaagtagtcctggtcctgacaggcttgtcctacaaaatgggagagaggagtcacct
actggttccccatgcgccaccccacctcctctacccaaccttgtatcacccctaaccagc
ccctcgtcaaccacatctaccacttctactgcttcttctaccacctccggtgagaataca
gatattccagagggaaggaggcccccaccccacccctcccatcaccaacagccccaccct
cataaccccaatcatccccatcaccctaccaagcagcaatcagctgatgctggacagtct
tccgttatcacaccgttaccgatgaggcagaggagtaggacgttaggagacacgcccctc
accccgaccacgcccacctcaccaagggcgacttttcagtttgaaggggatcagttcaaa
gccctcagagcccctaagcagaagccacccctgatcagggcaatgagtgtaggtggaaga
gcacatcttctaagcccccctgggcatagcccccgtaccccattgatgacctctagcacc
cgtacctcatggcgtcaggcaatcttcaaccgggttgtgacaccgatgagtgagagcaag
gcaccacctcgttttccagaccagagcgagagtgtgttcgaggaggaagaggaagacaat
gaggaaaagaaggaatctaaatctagtcctgtcgtcaagagattcacctccagactagca
gtgagggcgctctggcaacgagccattagggaacaaattatactcaatcgtatggataaa
gaaaacaaaagaatacaagctcgccaagatgcggtgattgagaagaagatgaagttggac
tatgaagaaatcacaccatgtctggtacaggtcacaaagcaatgggatagactcattgct
atacctaacagagcaaacaccatcataccttatgatgaaatcaataccttattcaaagaa
ggtgtaccgaggacgagacgaggtgatatttggatgatgttatctgaacagcatctatta
agaatggtccctggagcatctcagataccggaatctgaaccatacacagagcttctaaaa
caactcacaacacaccaacatgctatcctcattgacttgggacgcacttacccaaaccat
ccatatttctccaatgctcttgggcgtggtcagctatctctcttcaatcttctgaaggcc
tattcactccttgatgcagaggtcggttactgccaaggcctcagctttgtggctggaatt
cttctcatgcatatggaagaacatgatgcctttaagatgttgacctatctcatgtttggc
tggggttttagaagacagtataaaccagacatgacagctctacagatccagatgtatcag
ctttcacgtctccttcatgacttctatcatcgtctacacaatcacctggagcagaatgaa
gtggctccatctctttatgcagctccttggttcctgacactttttgcctctcaattccct
cttggctttgtctcaaaggtctttgatctgatcttccttcaagggtttgaggtgatcttc
aaggtagctcttgtcatccttggtagccatgaagaactgatcctacaatgtgatggcttt
gagtctatcattgacttcatcaagaatcaattaccatcccttggtatcgtccagatggag
aaagtcattaacaaggcttaccacttggacatttcaaaggaacttcatgcctatgaagtc
gagtaccatgttattcaggaggaaatgctgccctcgcctgtccaaccaaagtctatgcag
cgagacatcgatcagctggaattcagtaatcgtaacctacgtcgtcataacaacgagctc
ttagaacaacttcagtctacacacaatacaatacagaatcagagatctctactgcaaaca
aaacagacaaccgagaacaatctgcgattggaaatccggaacttgaacctggagagggca
gctcttctggacaccattgctaagttacaggcccttatcccagagaatattcttagcaat
gccagtctagacctaattcaaccaaagagagattacaagtgctatgacagtgaatcctct
caccagaccatagagagtgctgccgggggtggagacaatctgtccatcgacaccgactcc
attgaagacatcgatggggaggtcgcagccatcaacaaagtacttgctctgaaggaagag
aggtctaggaataatagtggtggaagcattggaagtggacagagtgcgagtacaaataca
agcgaggcagatattccatgtattatgatcacagacactaaatcgatatcgtcactgtga
DBGET
integrated database retrieval system
