Lytechinus variegatus (green sea urchin): 121411341
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Entry
121411341 CDS
T11173
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04137
Mitophagy - animal
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121411341
04137 Mitophagy - animal
121411341
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvg01002
]
121411341
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121411341
04121 Ubiquitin system [BR:
lvg04121
]
121411341
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121411341
Peptidases and inhibitors [BR:
lvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121411341
Membrane trafficking [BR:
lvg04131
]
Endosome - Lysosome transport
Others
Others
121411341
Ubiquitin system [BR:
lvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121411341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
121411341
NCBI-ProteinID:
XP_041459947
LinkDB
All DBs
Position
3:52856341..52880735
Genome browser
AA seq
1186 aa
AA seq
DB search
MPGALKKPLYISSSLEELNKKVDQNITKGQTSKILARSANKVFTEAEKADKNLDEERAYV
LFMKYLTLWKAVQKAKDYKLHKDYIDTLIGTSGCRKAIDKAEELSASLTLRYNELEEAKE
ASKKLEEEKEKVKTNGLKDAKSKDGDEDSVENGVPEEEEKKRELGKDGVVTAIELYHELV
SNTNSVLIMDVRRSDHFKDSHMNIGECMSIPAEILKPGTTAATLEKGLGEEAKAMWKKRT
DVEFIVLVDWDQCQNTDSTLAIVQTAMVKWDWGTTYKNPSLVLKGGYEDWLFKYPMYTNN
PHAKKPVEKGEETKDLLDFDYPVFEDEKPLPMALPPQQLNNAPTSQAPSVQNGNDNGVHQ
DRMFFISGKPGHTSQPGQRPVVNRSVKPGATKPDPPAPSRDQIDLSRDKPKSTPTPVANQ
INNNLENKTAPQTNLANSGPGPAVSTTKPTPAMPAVNRNLKPKVDNKVANINVKDFSDST
AESSNASVNININKPRTEPRDDSTMSMKDPSVEAGMKSDVHLEELKKKEEQARNDLNKMR
YDKTKAENEKLKEEKLEMEKNLLKLQQELAEAKARQEQRKRTSQKTSSPSHTAQSPSPVA
AGSKDAPDSASSSSDATPTTVSSTPAPREETTDSKSKEPAADRNAVQPNQNSNAATAEKS
ASGASVGEVSTSSSTSSSASSPPVTKPAATAPALPKGWEKRFDEKSKRYFYIDHNTNTTQ
WHPPGEPSPKPVASEAKGSIHGPTTAVASSKPKGESPSSRPSGQVTRKPLKSDSVEPSAK
SSGLKRSFSSPNIAQMVMNEGEASFSKPFPSVDRSTKPVERPPQVISQTTHSRVRHLNPV
HGSQGRALTGLRNLGNTCFMNSVIQCLSNTTPLAKYFITETYLREINRANPLGRGGEVAE
EFAAVVTALWTGLYRSIAPRDLRDTVTKYVPEFRKHVGHHHDSQEFLLFLMDGLHEDLNE
VKKREYIKEEDFSKYPDEQAATLSWQNHDKLNRSIIVSLFQGQFKSTVQCLSCNNISVKF
EAFMYLSLPIPSNSRCTLNDCLQRFSQPEKLAGDNATHCTRCKGKRNSKKTILIWKLPNI
LLIHLKRFYYEGMWRQKLQTNVDFPNDLTMDRYVIGPKRRDIYQLYGVSNHSGGLDGGHY
TACCRNAANKRWYKYDDHEVYDASQSSIKSSAAYILFYSSIPLSPP
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagcattgaagaaacctctctacatcagctcctccctagaggaactcaacaag
aaggtggaccagaacataaccaagggacaaacttcgaaaatattggctagatcagctaac
aaggtatttactgaggcagaaaaagctgataaaaaccttgatgaggaacgtgcctatgtg
ttgttcatgaagtacctcacactatggaaagctgttcagaaggcaaaagattataagtta
cacaaggattatattgatactctcattggtacttcaggatgcagaaaggctatagataaa
gcagaggaactctcggcatcattgaccttgaggtacaatgagctagaggaagcaaaggaa
gcaagtaagaaactagaagaggagaaagagaaagtgaaaacaaatggtttgaaggatgcc
aagtccaaagatggagatgaagattcggtggagaatggagttccagaggaggaggagaag
aaaagagaattaggaaaagatggtgtggtcactgccattgagctttatcatgaactagtg
agcaacacaaattcagtcctaatcatggacgtccgtcgatctgaccatttcaaagactct
cacatgaacatcggagagtgtatgagcattcctgccgagattctgaaacctggaacgact
gctgctacactggagaagggtttaggagaggaagccaaggctatgtggaaaaagagaact
gacgtggagttcattgtactcgtagactgggaccaatgccagaatacagactccactctt
gccatcgttcaaactgccatggttaagtgggactggggtactacttacaagaatccatcg
ctggtactaaagggtggatatgaggactggctcttcaaataccctatgtatacaaacaat
cctcatgcaaagaaacctgtagagaagggagaagagaccaaggatttgttggattttgat
taccctgtatttgaagatgaaaagccactgccaatggccctacctcctcaacaactgaac
aatgcaccaacaagtcaggcaccctcagtgcagaatggcaatgacaacggtgtccaccag
gacaggatgttcttcatctctgggaaacctggccacactagccagcctggccaaagaccg
gtagtcaatcgatccgtgaagcctggtgcaaccaaacccgatccacctgctcctagtaga
gatcagatagacttatcaagagacaaacctaaatcaacacccactcctgtagctaatcaa
atcaataataacctagagaacaagacggcgccacagacaaatcttgccaacagtggacct
ggacctgcagtgagtactacgaagccaactcctgcaatgccggctgtcaatcgcaatctg
aaacccaaggttgataacaaagtagcaaacatcaatgttaaagattttagtgattccact
gctgaaagttcaaacgcctctgtgaatatcaatatcaataagccaaggactgagccaaga
gatgatagtactatgtccatgaaggatccttcagtggaggcaggcatgaaatcggatgta
cacttagaagagctcaaaaagaaagaagagcaggctaggaatgacttgaacaagatgcgt
tatgacaagacgaaagctgaaaatgaaaaactcaaagaagaaaagctcgaaatggagaag
aaccttctgaaactacagcaagagcttgcagaagccaaagcaagacaggaacaacggaag
agaacatcccagaagacctcttcaccaagccatactgcacagtctccatctcctgtggct
gctgggagtaaggatgctcctgattctgctagcagttccagcgatgctaccccaacgact
gttagctccacaccagctccaagggaggagacaacagatagtaagtctaaggagcctgct
gctgatagaaatgctgtgcaacccaatcaaaattcaaatgctgccacagcagagaaatcc
gcttcaggagcttctgtaggagaggtcagcacctcatcaagtacttcatcatcggcatct
tcaccacctgtaacaaaaccagctgcaactgctccagctttgcctaagggttgggagaaa
cgattcgatgagaagagtaaacgctatttctatattgatcataacactaacaccacccaa
tggcacccaccaggggaaccatcccctaagcctgtggcaagcgaagccaagggatctatc
catggtcccactacagcagtggcttcatcaaagcccaaaggtgaaagcccctcatcacga
ccttctggtcaggtaacccgcaaacctctcaagtccgactcggtggagccttctgccaag
tcaagtggtctcaagagatccttctcctcacccaacatcgcccagatggtgatgaatgaa
ggtgaagcaagtttctctaaaccatttccatctgtggataggagtactaaaccagtggag
aggccaccacaggtaatatcccagactactcacagtagagtccgtcatctcaatccagtg
catgggagccaaggtcgtgcattgactggtctacgaaaccttggtaacacctgtttcatg
aactctgtgatccagtgtctaagtaacactacaccacttgccaagtacttcatcacagaa
acctacctgcgtgaaatcaatagagctaaccccttggggagggggggtgaagtggccgaa
gagtttgcagcggtggtcactgcactgtggacaggtctgtatcggtcaatcgcaccaaga
gaccttagagacactgtcaccaagtatgtacctgaattcaggaagcatgtcggtcaccat
catgattcacaagagtttcttctattcctcatggatgggctccatgaagatttgaatgag
gtcaagaaacgagagtacatcaaggaagaagacttcagcaagtatccagatgagcaggct
gccaccctctcctggcaaaaccatgacaagctcaacaggtctatcatcgtcagtctattc
cagggtcaattcaagtccacagtccagtgtctatcgtgtaacaacatatctgtgaagttt
gaggcattcatgtatctgtctctacccataccatcaaacagcaggtgtaccctcaatgat
tgcctgcagaggttctcacagccagagaaacttgccggagacaacgccacacactgcaca
cgttgtaaaggaaaacgaaactctaagaaaaccattcttatctggaaactgcccaacata
ctccttatacatctcaagcgtttctattacgaaggcatgtggcgacagaagctgcagacc
aatgttgattttcccaatgatctcacgatggatcgctatgtgataggtccaaaacgcaga
gatatttatcagctctatggtgtctcaaatcactccggaggtctcgatggtggacattac
actgcatgttgtaggaatgctgctaataaaagatggtacaaatatgatgatcatgaagtc
tatgatgcctcacagagtagtataaagagttccgcagcttacattctcttttattcatct
atacccctgtctcctccgtga
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integrated database retrieval system
