Lytechinus variegatus (green sea urchin): 121411375
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Entry
121411375 CDS
T11173
Name
(RefSeq) protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121411375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121411375
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lvg04091
]
121411375
Membrane trafficking [BR:
lvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
121411375
Lectins [BR:
lvg04091
]
L-type lectins
121411375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
CCDC84
Ost5
YncO
Motif
Other DBs
NCBI-GeneID:
121411375
NCBI-ProteinID:
XP_041459994
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All DBs
Position
3:complement(54136551..54152585)
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AA seq
506 aa
AA seq
DB search
MAGYTNISITLLLLFLAVLYSSAQPPFKKFEYKYSFKGPHLIQKDETVPFWQYGGSALAS
DDKVRVTPSLRSRRGYIWSKMETDFDWWEIEVIFKVTGRGRVGADGLAIWYTQNRGDEGA
VYGSSDKWNGMGLFFDSFDNDNQRNNPYILVVTNDGTKMYDHHNDGLLQQIGGCMRDFRN
KPFPVRAKVEYYKNVLTVYFHQGLSSNDHDYELCLRAENVHLPQRGYFGVSAATGGLADD
HDVMKFLTHSLATPESKIDKDGFITDEEAKKFKDEFDEFQGKLQQQKEDFRQQHPDKIKD
DYDDSDSFFEDDFTRELKLILSTQNAVMQQIKQLGNKLDEIVGRQERTLSLVSAVQASSG
GGGGAPPVQHTGGAGSVIQRHEIDSLLNTQRELHQSVRDIRNVVGDVQNKAGLIYNRQPT
NQGAQMNQGNPLANHEMLDKINSIQDSVLKLTRRPEAQQAICPPIPDMPSCLTPTLFFVF
VLIQFFVIFLYTVYRSKQEAAAKKFY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtacaccaatatttcgataaccttgttattgctttttctggcagttctctac
agttctgcacaacctcctttcaaaaaatttgagtacaaatacagtttcaaaggtccacat
ctaatccagaaggatgaaacggttccattttggcagtacggaggaagtgctttggccagt
gatgacaaagttcgagtgactccttccctcagaagcagaagaggttacatctggtctaag
atggaaactgattttgattggtgggagatagaggtcatcttcaaggtcacaggacgtggt
agagtaggagccgatggactggctatctggtacacccaaaacaggggagacgaaggagcc
gtgtatggaagctccgacaaatggaatggaatgggactcttctttgattcctttgacaat
gataatcagagaaacaatccttacattctagtcgtgaccaacgatggtaccaagatgtat
gatcatcacaacgatggattgctgcagcagattggaggatgcatgagagacttcaggaat
aaaccattcccagtcagagccaaagtagaatattataagaatgttttgacggtatatttc
catcaagggttaagttctaatgatcatgactatgagctttgtctgagggcggagaatgta
catcttcctcagaggggatactttggtgtgtcggcagcaacaggtggtttagcagatgat
catgatgtaatgaagttcttaactcacagccttgctacaccagaatctaaaattgataaa
gatggcttcattacagatgaagaggctaaaaagtttaaagatgaatttgatgaattccaa
gggaaattacagcaacagaaagaagactttcgtcagcaacacccagataagatcaaagat
gattatgatgatagcgattcattttttgaagatgattttaccagagaattgaagctcatt
ttgtccacacagaatgctgttatgcaacaaataaaacaactaggaaataaattagatgag
atagtcggtcgtcaggagaggacactctccttggtgtctgcagttcaagcttcctcagga
ggagggggcggggcacctcctgttcaacacactggtggggcggggtctgtaatacagaga
catgaaatagattcacttctaaacactcaaagagaattacatcaatcagtcagagatata
agaaatgtagtaggtgatgttcagaataaagcaggtctgatatataatcgtcagccaacc
aatcagggagcacagatgaatcaggggaatccccttgcaaatcacgagatgctagataaa
atcaactctatacaagacagtgtactcaagctaacacgaaggcctgaggcacagcaagca
atatgtccaccaataccagatatgccttcatgcctcacaccaacattattctttgttttt
gtacttattcaattttttgtgatttttctctacacagtatataggagtaaacaagaagca
gcagcaaagaaattttattaa
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