Lytechinus variegatus (green sea urchin): 121411601
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Entry
121411601 CDS
T11173
Name
(RefSeq) zinc phosphodiesterase ELAC protein 1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121411601
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121411601
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121411601
Prokaryotic type
121411601
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Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_2
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
121411601
NCBI-ProteinID:
XP_041460335
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Position
3:62519080..62532287
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AA seq
360 aa
AA seq
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MDITFLGTASAHPSPTRGVSGTVVKSDGEAWLVDCGEGTQIQLMKSSVKPGRITKIFITH
LHGDHSFGLPGLLCTLNTAFLDPDREGSIMEIYGPQGLRKYVRVSLELSRSEMSYSYVVH
ELQVPDTDHPHDWESWKPSHEAEGSLHPNEKAGRNITMNADGIYNLHEDDRHIIQAAPLT
HRVPCFGYVFLEKPQPGRLDAEMLRSRGIPPGPLYARIKAGQEIEAPDGSVITPQDVVGP
TRPGRKIVILGDTKESSRIIPIAMNADVLVHEATVADELHDICIERGHSTPAMAGQFAAQ
IQCKHLVISHFSQRYSPLSRQCKEGDETVQKLLDQTRATFPGGKVTAAEDLMTISVPARK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggacataacttttttaggaacagcatccgctcacccatcacctactcgaggagtgtca
ggcacggtggtaaaaagtgatggagaggcatggcttgtagattgcggtgaaggcacccag
attcagttaatgaaaagctcagtcaagcctggtcgcatcaccaagattttcatcacgcat
ctccatggtgaccactcgtttggattgccgggtctattatgcaccctcaatacggccttc
cttgatccggacagagagggcagtattatggagatatatggtcctcagggtttaagaaag
tatgtccgtgtgagcttggaactgtcaagatcagagatgtcatactcctatgtggtacat
gagcttcaggttccagatactgaccatccccacgactgggagtcatggaaaccatcacat
gaggcagagggttcattgcatccaaatgaaaaggcaggaagaaatatcactatgaatgct
gatggcatttacaatctacatgaagatgatcgtcatatcatacaggctgcccctctgact
caccgggttccttgctttggatatgtgtttctcgagaagcctcaaccaggcaggttagat
gctgagatgctccggagtagggggattcccccaggaccactgtatgccagaatcaaagca
ggtcaagagatagaagctcctgatggctcagtcatcacaccacaagatgtggtaggacca
acaagaccaggaagaaagatagtgatccttggagacacaaaggaatcctcaagaatcatt
cccattgccatgaatgcagatgtcctggttcatgaggctacagtagcggatgaacttcat
gatatatgcattgagagaggacactcaaccccagccatggctggtcagtttgctgcacag
atccaatgcaagcatctagtcatcagtcacttcagccagagatattccccattatcacgt
caatgcaaggaaggggatgagactgttcagaaacttcttgatcagacaagagcaacattt
ccaggagggaaggtgactgccgcagaggatttaatgaccatctctgtccctgcaagaaag
tga
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