Lytechinus variegatus (green sea urchin): 121411652
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Entry
121411652 CDS
T11173
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121411652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121411652
Membrane trafficking [BR:
lvg04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121411652
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank_4
Ank
Roc
PH_6
Ank_5
Motif
Other DBs
NCBI-GeneID:
121411652
NCBI-ProteinID:
XP_041460406
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Position
3:64293077..64346421
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AA seq
904 aa
AA seq
DB search
MMRTSLSSVLLSESSPHNGVDEGARNKDGGGTSSRRSLSFRRKKRSLSWRKNRCLSDIIN
VDSFVNSQEWTLSRTVPELKLGVVGSLTSGKSALVHRYLTGSYMQEESPEGGRFKKEIVV
DDRSYLLLIRDEGGPPELQFCSWVDAVILVFSVEDEMSFNMLYNFYAKIAHYRNTADLPM
ILVGTQDALTQNSPRLIDDTKAKKLAADLKRCPYFETCAMYGLNVERVFQDAAQLIVEKK
HYHPMVSLSNSSSSLPSTPHSVRSNPFPGTAPFPGPNTLSAPSINQSNSQHHQQQQQGGG
TTGSMGSRKGSRDSIREGSQGSNQGSDRGPLQPSPSSTPNFTRKSRRKSNLFTPNKGKPQ
NTEAKNGGAGDSSSLPNHSQRGIGSGRSIPVKQGYLYKRSSKALNKEWKKKYVTLCDDGR
LTYHPSLHDYMDDVHGKEIRLLNTTVKVPGRRPPLARANTQVGSNSSNSGTNGIANNMKA
MTLSGHAGPGIHSNQAAISRDTSNPMLSQREVQEAKTKSTSLPRDTCFSDAVVISNSSVM
PSSMSNGVDAPLSFPQMGMTSKDGHGSKKKHRRMRSSGGNKSLDHHHLEAESEDCEFVIV
SLDNRQWNFEATSSEERDGWVVAVEQRILACLQTNESAKGKGQLSNLEQSAIVETIRKVR
GNGSCVDCEAQNPDWASLNLGSLMCIECSGIHRNLGSHISRVRSLTLDGWPPELAQVMML
TGNALTNSVFEVSLHSQSKPSVTSGREEKEKWIRAKYEKKEFIAPYPYPERNLGQQLMEA
VIREDIRAVMLLLAHAQDDEVNYRYGDGDGRSALHLSCAMGNVVITQLLIWYKLNVNIMD
SDGRTALGYARSVGADDCAKVLVMNGCHDNGDLNSNMNNSTLLRVPRGPGRGHHLTGDKI
SSVI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggacgtcgttatccagtgtcttgctatccgaatcaagcccccacaacggggtc
gatgaaggggccagaaataaagacggtgggggtacttcgtccaggagatcattgagtttt
agacgcaagaaacgtagcctgagctggcgaaagaacaggtgtctgagtgacataatcaat
gtcgattcatttgtgaacagccaagaatggacactgagcagaacagtcccagaactgaaa
ttgggtgtagtggggagcttaacaagtgggaagtcagctttggtacatcgttacctgacg
ggatcatacatgcaagaggaatcaccagaaggagggagattcaagaaggagatcgttgtg
gatgacaggagttacctgctcctcatcagagatgaaggaggccctcccgagctccagttc
tgctcctgggtggatgccgtcatcttggtcttcagtgtggaggacgagatgagtttcaac
atgctgtacaacttctatgccaagatagcccactaccggaatacggcagaccttcccatg
attctagtgggtacccaagatgcactaacgcaaaactcaccgaggctgatcgacgacaca
aaagccaagaagctggcggccgatctcaaacgctgcccttactttgaaacatgtgcaatg
tatggactcaacgtagaaagggtcttccaagatgccgcccaattaatagtggagaagaag
cactatcacccgatggtgtccctctccaactcaagcagctccctccccagcacgccccac
tcggtgcgtagcaaccctttcccgggtaccgcccccttcccgggtccaaacaccctctcc
gcccctagcatcaaccaatccaacagccagcaccaccagcagcagcagcaaggaggggga
accactggctccatgggctctaggaaaggcagtagagactccatcagagaaggttcacaa
ggctccaaccaaggctcggacagaggaccccttcaaccaagccctagcagtacacctaac
ttcacaagaaagtccaggaggaaatcaaatctcttcacgcccaacaaaggcaaacctcaa
aatactgaggcaaagaatggcggtgctggtgatagtagctcccttccaaaccacagtcaa
agaggaatcggtagtggaagaagtattccagtcaaacagggttatctttacaagaggagt
agcaaagcgttaaacaaagagtggaagaaaaagtatgttacactttgtgatgacggcaga
ttaacgtatcacccaagcttacatgactacatggatgatgtacacggcaaggagattcgg
cttctgaacacgacagtgaaagtacccggcaggagacctcctttagccagagctaacacc
caagtaggatccaattcatcaaactcagggaccaatggcatcgctaacaacatgaaagct
atgacattatcagggcacgctggacccggcatccattccaaccaagcagccatatcaaga
gacacaagtaatccgatgctgtcacaaagagaagtacaagaagcgaagacaaagtctaca
tcactgccacgggatacgtgtttctcagatgctgttgtcatctcaaattcatctgtcatg
ccatcaagtatgtcaaatggtgtagatgcgcctctgtcgttccctcagatgggcatgaca
agtaaagatgggcacggatccaagaaaaaacatagaagaatgaggagttcaggagggaac
aaaagcttagatcatcatcatttagaagcagaaagtgaagactgtgagtttgttattgta
tcattagacaataggcaatggaattttgaagccacaagttcagaggagagggatggatgg
gtggtggccgtcgagcagaggatattagcatgtcttcagaccaatgagagtgcaaagggt
aaaggtcaactctccaatcttgaacagagtgccatcgtagagaccattagaaaagtacga
ggcaatggatcttgtgtcgactgcgaagcacagaatcccgactgggccagtttaaatctt
ggaagcctcatgtgcattgaatgttcgggtattcacagaaatctaggctcacatatctcc
agagttagatcattaacattagatggatggcctcccgagttagcgcaagtgatgatgctt
accggcaacgcgttgacaaacagcgtgttcgaggtgtcgttacacagtcagagcaaacct
tcagtcacgtcgggtcgcgaggaaaaggagaagtggatacgagcgaagtatgaaaagaaa
gaattcatcgcaccctacccgtaccccgagagaaaccttggtcagcagcttatggaagcg
gtcatcagggaagatatcagggcggtcatgctgttattggcccatgcgcaggacgacgag
gtcaactatcgctatggcgatggagacgggaggtcggcccttcacctgagctgcgccatg
ggaaacgttgtcatcacccaacttctcatttggtacaaactcaatgtaaacatcatggat
tctgatgggagaaccgcgctggggtacgcgaggagcgttggagccgacgattgcgcaaag
gtgctcgtcatgaacggttgccatgacaatggagatttaaactctaacatgaacaatagc
acgttacttagagtgccccgaggacccggaagggggcatcatcttaccggcgataagatt
tccagcgtaatttag
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