Lytechinus variegatus (green sea urchin): 121411758
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Entry
121411758 CDS
T11173
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121411758
Enzymes [BR:
lvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121411758
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121411758
Prokaryotic type
121411758
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
121411758
NCBI-ProteinID:
XP_041460538
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All DBs
Position
3:68008131..68015907
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AA seq
871 aa
AA seq
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MFGIECYVSQHEGFKGTVKSNPEDFQVTEISIDGKLASLTDTRIDLSAELGIGSIDSAGD
SHASPLELDSVCAQISSTSDTSKSPSIGIPTQVGESSPIQVNTPKATQDSLPTDCRKCLE
NILSADTFTELDKFAASELTLLKSSHSESRMEMNPSTLETHQAHLNLGVIASKESRTVIH
KCVRYLYPHLRTQIHRMPSGGLEIHISREPAVVEFQHLQIPLSAVLEFLKFVELRDREDT
FHFEGLESKDQRTKLHRLVAKHFGTFLETKTFGDGTNNREHQKVAVRFRPIKERKKRKGG
ESHPQDSVFTGFTLQKINTETLSAIQQLARLIGVQTSAFTYAGIKDKKAVTTQEMAVKDI
TSKRLEDISNQLPQWLKVGSIHPRTKPMVTAELWGNHFDITLQNVERKAESSKIEDGSEG
CGRVELKTSIEHCIKCVEEKGFINYFGEQRFGASSHDPSQALTTISPADVGHAILQGNYK
EAVSLILSPDDGPCANPSDHTNVAKRCFRHVGSPREALKLMPAMKTRECLLLKALNRHGT
DDEGCIKALMNIPHNMRQMYVHAFCSLLWNQMASWRMRYHGYQVVEGDLVSTTDSKVHTV
TEDDIAQDKYTIMEVMLPLPGNNIQYPSHTAGGEYQRRLGEAGLGECTFRIPALKLNIPG
GYRNVIARPRNLKWGLDSTGDQCIDKRDDGGDYSRDMEDTTLPSNHEVSPAGNVSDASSA
DSILPAGSGNLMEASGRHVKLGSNESDSNPAVDGRNKEHRVSANQPLDVSACLSACHMVS
NTHGNSTATTDGRTLPFDTSKTTDNPNSGVTTHQQYDGQLPCQTRDGLSHGNRQEDEFQS
SSQSLKRTLNLSFNLPASCYATVFLRELMKS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatagaatgctatgtgtcccaacatgagggcttcaaggggactgtgaagtcc
aatcctgaagatttccaagtgactgaaatttcaatagatggaaaactagcatctttaaca
gatactagaatagatctgagtgcagaactgggaatcgggtccatagacagtgcaggagat
tctcatgcatctcctttggaattggattctgtgtgtgcacaaattagttctacatcagat
accagcaagagcccttctataggtatccccacccaagtaggtgaatcatcacccatccag
gtcaacactccgaaagcaactcaggactctcttccaacagactgtaggaaatgtcttgaa
aatattcttagtgcagacactttcactgaattagacaaatttgccgcaagtgagctgaca
ttgctgaaaagttctcattctgaatcaagaatggagatgaaccctagcactctggaaaca
catcaagcccatcttaatctaggtgttatcgcaagtaaagaatctcgtactgttattcac
aagtgtgtgaggtacctttaccctcatctgagaacacagattcacaggatgccgtctggg
ggactagagattcacatttcaagggaacctgcagtagtggagtttcaacatcttcaaatt
cctctatcagcagtactggaatttctcaaatttgtggagctgagagatcgagaggatacc
tttcattttgaggggctggagtccaaagaccagaggaccaagctgcatcgtttggttgcc
aagcacttcggaacattcttggaaacaaagacctttggagatggaaccaacaatagagaa
catcagaaggttgcagtgcgcttcagaccaatcaaagaacgtaagaagaggaaaggagga
gaaagtcatcctcaagattcagtttttacagggtttactctacagaagatcaatacagag
accctgtctgccatacagcaacttgccagattgataggagttcaaacctctgctttcacc
tatgctggcatcaaggataagaaggctgtcaccactcaggaaatggctgtaaaagatatc
accagcaaaagactggaagatatttccaatcagctcccacaatggctgaaagtaggttcc
atacatcccaggaccaaaccaatggttactgctgagctatggggaaatcactttgacata
acccttcagaatgtggaaaggaaggctgaatcatctaagattgaggatggatctgaggga
tgtggaagggtagagcttaaaacctccattgagcattgcatcaaatgtgtcgaggagaaa
gggttcatcaactactttggagaacagcggtttggagcctcgtcccatgatcccagtcaa
gcactgacgactatatcaccagctgatgtagggcatgccattcttcagggaaattataaa
gaagcagtttctctgattctgtctccagatgatggaccatgcgcgaatccatctgatcac
accaatgttgcaaagcgatgctttcgacatgtaggctctcccagagaagccctcaaactg
atgccagccatgaaaactagagagtgtcttttgctcaaggctctaaatagacatggtacc
gatgatgaaggttgtatcaaagctctgatgaatatccctcacaacatgagacagatgtac
gttcatgctttctgcagtttgctgtggaatcagatggcatcatggaggatgcgttaccat
ggttaccaagtagttgagggtgatcttgtgtctactacagattcaaaggtgcatactgta
actgaagatgacatcgcccaggacaaatacaccatcatggaggtcatgctgccgttgcca
ggcaacaacatccagtatccatctcacacagcaggaggcgagtatcaaaggagactgggt
gaggctggactcggggaatgcaccttcaggatacccgccctcaagctcaacatcccaggg
ggctaccgcaacgtcattgctcggccgagaaatctaaaatggggtttggattccactgga
gatcagtgtatagacaagagagatgatgggggagattactccagagatatggaagataca
acgttgcctagcaaccatgaagtaagccctgccgggaatgtcagtgatgcctcgagtgcg
gatagcatcttaccagcagggagtgggaatctaatggaagcatctgggcgccatgtgaaa
ctgggttctaatgaatccgatagtaaccctgctgtggatggccgtaataaagagcatagg
gtcagcgcaaaccaacccctggatgtctctgcttgtctttctgcttgccacatggtttcg
aacacacatggaaactctactgccaccaccgatggtagaactcttccatttgatacttcc
aaaacaacagataatcccaatagtggagtcacaacccaccaacagtatgatggtcaatta
ccatgtcaaaccagagatgggttatctcatggaaatcggcaagaggatgaatttcaatca
agcagccaatcgctaaagaggactttgaatttgtcatttaacttgccagcttcctgctat
gccacagtttttctgagagaactgatgaagtcatag
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