Lytechinus variegatus (green sea urchin): 121411878
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Entry
121411878 CDS
T11173
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121411878
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121411878
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GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
Motif
Other DBs
NCBI-GeneID:
121411878
NCBI-ProteinID:
XP_041460698
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Position
3:72355454..72461139
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AA seq
1244 aa
AA seq
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MDVLGHACSACLSALKRSNPKSNTSGIPTGFHFGVILWILLITPQGTRTDVTIRRNTVIS
WADELGRRLYNLSRTYSGSDVVHEQYGSEQNIEILPVNGEDLVQSMANQMQTMLQDKAKA
VERIVQSAEEGFLNHDYDNATEFTYYNAILVNTNTTVDPDLEKDIRKELDVTPDSHFDNI
PINTTIATIQVPTNVYNQGIELLNSIEATVLLDETYHENYQNDPTLTWQYFGSRTGYFRV
YPGYRWVPPIEDLDLYDCRVRGWYVEGATSPKDVVILVDMSGSMTGLYVEIAKYAIKKIL
DTFGDNDFVNVISFNETTKFIQPCFNDTLVQATSDNKNLIKDALTRSVPKLEPYGMADLS
KAVRHAFNLLSDFNSTNRGSGCNQAIMIISDMLTETAEDVFRELNPNQTVRVFTYQTGRE
VDGPTNLIKVACENRGYYTRLATISDVEEHVTSYLHVLSRPMVNKRLRKTVWSSVYWDAL
GLGLTCSVSQPVFNVKNETMDKGILEGVAGCDVPINELKKFTPPFKLGVNGYSFAITNNG
YILYHPELRYLHTDGKVKPNYNSVDLAEVELSDTEDVDSSKWSSAHLVSGKELRNEMVDR
LSGSVTMEIKHMFDDMKRVSVRRSKYYFTPLHDTPYSLGISLPESYANKHLETPALFEQE
PSDNQSSADVCEIQQAARLLFGDGTLGQTIIANWLYCKINYSSSERYEGEEHVARFLQDA
AKKGGKLSSTCDTVMVNHLIFDANVTRFMPDYWKLVYGEALPSTVDTTMFTTLPTNETEQ
EIFSNIQNILAQIDEYCSPGGRGYTTATPHNQTQDSAEETDILTTGDTGTHPTEPPNMRY
TTSLFGTTENVPYLDFPYLDPKRDGVVLSFLGTYGGLTRIYHNPNMDYMFPDFSSKDRQN
TIEEDYFRRPVDEINEGFIYSVPFDTDSDYMFYSDPLVTASTAIHVNKDGSTFVTAAAGY
QFLGSALKELFFNITSYQYEEDCGYDCTPSCYNDSVECFLIDNNGYIVVSKDEGQVGTHF
AMYSQNLRLFDKLVSDNIFQEITVVDYQGMCERNFTVSAAPTLRNTLSNIMSMFTWLANQ
FIVFLSHASMYDWLISTFLPGDTLAERVWFDPCEHEYTFYVANKTGNIVGGQLYGSFQTS
CTDCTKSFGVQPVPYSNLLLVIQDRDCSCNARNSIQLDPEEVIYNETAWCQRLRQFKTRR
RPDTCFKYDPNEDSSECGRGIASRPSTCLILIGLVLTAWWRHHY
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggatgttcttgggcatgcttgttcggcttgtttatcagctttgaagaggagtaatccc
aaatcgaatacctctggaatacccacaggatttcattttggagttatattatggatatta
ctaattaccccacaagggactcgcactgatgtgacgatacgcagaaatactgtgatttcg
tgggctgacgaattaggaaggcgtttgtacaacctcagcagaacgtacagcgggagcgac
gtcgtccacgagcaatatggaagcgaacagaatatagagatcttaccggtcaacggagag
gatctggttcaaagcatggctaaccagatgcaaacaatgttgcaagacaaggcaaaagct
gtcgagagaatcgttcagtcggctgaggaaggttttctgaatcatgactacgacaatgca
acagagtttacgtactacaatgcgatccttgtgaatacgaatactacagtggatccggat
ttggagaaagatatccggaaagaactggacgttacaccggatagccactttgacaatata
ccgatcaacactactattgcaactattcaagtgccaactaatgtatacaatcaaggtatt
gaattgctgaatagtattgaagcgacggttctgttagacgaaacctatcacgagaattac
cagaacgatccgactttgacttggcagtacttcggaagcagaacagggtatttcagagtc
tacccagggtatagatgggtcccacctatagaggatctcgatctgtacgattgcagagta
cgtggctggtatgttgaaggggccacctctcccaaggacgtggtcattctagttgacatg
agcggcagcatgaccggactctacgtcgagatcgccaaatacgccatcaagaagatcctc
gacacctttggcgacaacgatttcgtcaacgtcatcagtttcaacgaaactaccaagttc
attcagccatgtttcaacgataccctcgtgcaagctacctcagataacaaaaatttgatt
aaagatgcactgactagatcagtccccaaactagagccgtacggtatggcagacctatca
aaggctgtgagacacgcttttaatttacttagtgatttcaacagcacaaaccgtggttct
ggatgcaaccaagctatcatgataatctccgacatgctcacagaaacagcggaagatgtc
ttcagggaactcaacccaaatcaaacggtaagggttttcacctaccagacaggcagggaa
gtagacgggcctaccaatcttatcaaggtcgcttgtgaaaatcgaggctactacaccaga
ttagcaacgatatctgacgtcgaagaacacgtaacgagttatctccatgtgctcagtcgg
ccgatggtgaataagcgactacgtaaaacagtctggagtagcgtctactgggatgctttg
gggcttgggttaacatgctcggtatctcagccagtttttaacgtcaaaaacgaaacgatg
gataagggaatacttgaaggagtagcaggttgcgatgttcccatcaacgaactgaaaaag
tttactccaccatttaagcttggtgtgaacggatattcgtttgcgattacaaataacgga
tacatcctctaccatccggaattgaggtatcttcatacggatgggaaagtcaaaccgaat
tacaacagtgtggatctagccgaggttgaattatccgataccgaagacgtggattcttcc
aaatggagttctgcacatctcgtttcgggaaaggagctccgtaatgagatggtggacaga
ctttctggcagcgttactatggagattaaacatatgtttgatgatatgaaaagagtcagc
gttcgacgcagtaaatattatttcactcctctccacgacactccttacagcttgggaatt
tcactccctgaatcgtatgcgaataaacatctagaaactccagctctgttcgaacaagaa
ccttcagataatcaatcttccgctgatgtgtgcgagatacaacaagcggctagactattg
tttggagatggaacactcggacaaacaatcatagcaaactggctgtactgtaagatcaat
tacagttcttctgagcgatacgaaggagaggaacacgttgctcgattcctccaggatgcg
gcgaagaagggagggaaactgagttctacctgtgatactgtcatggtcaaccaccttata
tttgatgccaacgtcactcgcttcatgccggattactggaaattagtttacggtgaagca
ctcccgagcactgtagacaccaccatgttcaccaccctacccaccaacgaaacggaacag
gagatattctccaacatccagaacatcttggcgcagatcgacgagtactgctcccccggg
ggacgggggtacacgacggccacgccccacaaccagacccaagattctgccgaggaaaca
gatatcctcaccacgggagacaccggtacccatcccacggagccgcccaacatgcggtac
accacctccctctttggtacgacggagaacgtcccttacctggacttcccctacctcgac
cccaaaagggatggtgtggttttgtcttttcttggtacatacggaggacttacacggata
taccacaacccaaatatggactacatgtttccggatttctcaagcaaagatcggcaaaac
accatcgaagaggattacttcagacgaccagtagatgaaatcaacgagggatttatatat
tctgtcccattcgatacggattcggattatatgttttacagtgatcccttagtgactgca
agcacagcaatacacgtgaataaagacggttccacgtttgtaactgctgctgccggctac
caatttcttggaagtgccttaaaagaattatttttcaacattacaagctatcagtacgaa
gaagactgtggctatgactgcacaccgtcgtgttataatgacagtgtagaatgcttcctt
atcgacaataatggatacatcgtcgtttcgaaagacgagggacaggtggggacacatttt
gccatgtattcacaaaacttgcgattatttgacaaacttgtcagcgacaacatattccaa
gaaataacagtagtagattaccaaggaatgtgtgagcgtaatttcaccgtaagcgccgca
ccaacacttcgtaacacattatctaatatcatgtcaatgttcacttggctggccaatcaa
ttcatagtcttcctaagccatgcgagtatgtacgattggctgatatcaacatttttacct
ggagataccttagctgagagagtatggtttgacccgtgtgaacacgagtatacattttat
gtcgcaaataaaactggtaacatcgtgggaggccagctgtatggttccttccaaacttct
tgtaccgactgcaccaagtctttcggtgtgcagccagtgccttattctaacctccttcta
gtcatccaggacagagattgttcctgcaatgcgagaaacagcattcaactggaccccgaa
gaagtgatttacaatgaaacagcctggtgccaaagactacgacagttcaaaacgagacgg
agacccgatacgtgcttcaaatacgatccaaatgaagattcatcagaatgtgggcgtggc
attgcttcccgaccttccacttgcctcattctcattggcctcgttttgaccgcttggtgg
cgccatcattattga
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