Lytechinus variegatus (green sea urchin): 121412613
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Entry
121412613 CDS
T11173
Name
(RefSeq) slit homolog 3 protein-like
KO
K05401
toll-like receptor 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121412613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121412613
04090 CD molecules [BR:
lvg04090
]
121412613
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121412613
CD molecules [BR:
lvg04090
]
Proteins
121412613
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
TIR
LRR_EndoS
TIR_2
Motif
Other DBs
NCBI-GeneID:
121412613
NCBI-ProteinID:
XP_041461325
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Position
4:24168043..24170966
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AA seq
893 aa
AA seq
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MAFKHRTSFPSKSVLACFIFPLVFQSKLMLSSGLLTGNTGHGCHQDFELRKAHCSNKGLD
SIPQNLAEDIEELDLSENNITVLENISFERYTRISTLDLSANDIRVIEPTAFWPLKNLTT
LLMILNSNLVLPETGLFRWTNEMTFLDLTGSNLKSIPNDILKWNKHLGRLDLGYNHLTFI
NISTCGSLEYAGLYDNHFEYITRESFIFSCQTDTLDLTGNPIKLIDPVAVAALHTRSLLI
GVAPESYSWTPEMLINLTMGISLSTTNELHIRDVGLEFVPKGVFSSFQQVSFNLLDISYN
KLNTLYPFVFSNLTLLSKLVIENNKLTSIEPSFFDGMQELRVLRLNFNSIRTINPNNQTW
TINLVELYLSTNSLMEISEFAFLGLQNLTIIDFRWNLQLAVLHMTSFTGVDNIQVIDLSD
CSITRLELYTPALVSFRMNRNSRGIFPLSPLEPGESFENAKNLVWLEIQDSEIWSSNLWH
SFRGVSLFGGLSNLTTLDMSNNPDIGKSDLAPGTFLQLSALQELGLSGCGISNLNPLLFS
DLVSLKKLDLSGNNLMQIRSGLFAKLGQVQSIKLDGNILAHLDEKAFSNNRNLAALSLAR
NKLTGLNESTFKPVFSTLSVFDLSQNPLVCTCDLEWLLDWLNGTGNLTLVNKEQTICAPP
SLMSLRERPVLEFNAADICQLNYAIFSSIPIVIASVIAITVFVYHKRWQLKYKLFLLKLA
IVGYRERLDARDHMEYEFDVNIIFYDDDDDEGWIRENLKPTMEEQLPRFQRNVFGDADLI
LGMHYLDAVDYVVTRSYKTIIILSRAAVRDRWFMLKFRTAMDHVSDTQTEFVVVVFLEDI
PDDELPFLVRLYLNDGRPYLHWTPDVRGQEYFWNELAKNLTINLLTNDLIPNE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaaacaccgtacatcgtttccctcaaagtcggtcttggcttgtttcattttt
cccttggtcttccaaagcaagttgatgctatcctcaggacttcttacaggaaatactggt
cacggatgtcaccaagactttgaactaagaaaagcacactgtagcaacaaaggccttgac
tctattcctcaaaatcttgccgaagacatcgaagaacttgatttgtctgaaaacaatatt
actgttctcgagaatatttcgtttgaaagatacactcgaatttcaacattggatctttcg
gctaacgatatcagagtgatcgaaccgactgctttctggcctctcaagaatttgacgacc
ttgttgatgatcctgaacagcaacctagtgcttccagagacaggcttattcagatggaca
aatgaaatgaccttcctggacttgacaggatcgaacttgaagtcgattccaaatgacatc
cttaaatggaacaaacacttgggacggttggacttgggctacaaccacctcacttttatc
aacatcagtacttgtggttccttagaatatgctgggttgtatgataatcactttgaatat
atcacgcgggaatctttcatattcagctgtcaaactgataccctggatcttactggaaac
cctatcaagttaattgatcccgttgccgtagctgcgttgcatacccgctcacttttgatt
ggggtcgcccccgagagctattcatggacacccgaaatgctgataaatctaaccatgggg
atatctctttcaactactaatgagcttcacatccgtgatgttggtttggagttcgtccct
aaaggtgtcttttcgtcatttcaacaagtttcattcaatcttctcgacatttcctacaac
aaactaaataccttatacccgtttgtattctcaaatcttactttgcttagtaaacttgtt
atcgaaaataacaaattaacgtcgattgaaccatctttttttgacggtatgcaggagcta
agagtgctaagattaaactttaattcgatacgaactataaatccaaataaccaaacatgg
acaatcaatctggtggagttgtatttatccacgaattcactaatggaaatttctgaattc
gctttcctcggtttacaaaatttgaccataatagatttccgatggaacttacaacttgct
gttctccacatgacatcgtttacgggagtagataacattcaggttatcgatttatctgac
tgcagcatcactcgtttggagttgtatactccagctctggtgtcatttcggatgaatagg
aactctcgcggtatcttccctcttagtcctttagaacccggtgagtcctttgaaaatgcc
aagaatctcgtttggttggagatacaagactctgaaatttggtcttcaaatctgtggcat
tcattcagaggtgtttctcttttcggtggtctgtctaacctcacgacattggatatgagt
aataatcctgacatcggcaaatcagaccttgcacctggaacattccttcagctgtctgcc
ttacaggaacttggtttaagcggatgtggtatctcgaatctgaatccgcttttgttttcc
gatttggtatcccttaagaagctcgatctgtcagggaataacctgatgcagattcgttcc
ggcttatttgcgaagttggggcaggtacaaagcataaaacttgatggcaacattctggct
caccttgatgaaaaagcgttctcgaacaaccgaaatctcgcggccctttctctggcaaga
aacaaactgacaggtctaaacgagagcacgttcaagccagtcttttctactctgtcggtg
tttgatctttctcaaaacccgctagtttgcacatgcgatctagagtggttgcttgattgg
ctgaatggtacaggaaaccttactcttgttaacaaggaacagaccatatgtgcgcctcca
tcgctcatgtctcttcgtgagagacctgtgcttgagttcaatgctgctgacatatgtcaa
ctcaactacgctatcttcagttctattcccatcgtcatcgcttctgtaattgctatcacc
gtgtttgtctatcacaaacgatggcagctgaaatacaaactcttccttctaaaacttgca
atagttggttatagggaaagactggatgctcgagaccacatggaatatgagttcgacgta
aatatcatcttctatgatgacgacgacgacgagggatggattcgcgaaaatttgaaacca
actatggaagaacaacttccacggtttcaaaggaacgtctttggtgacgcagaccttatt
cttggtatgcattacttggatgctgttgattacgtagtgaccaggagttacaagaccatc
attattcttagtagagccgctgttcgtgatcgctggtttatgctcaagttccgtacggcc
atggatcatgtgagtgatacccagactgaattcgttgtcgtcgtcttcttagaagacatc
ccagatgatgaattaccttttctggtgaggctgtacctcaatgacgggagaccctacctc
cactggacacctgacgtcagaggtcaagaatatttctggaatgaattggcaaagaatctc
actatcaatcttctgaccaatgacctaataccaaacgaatag
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