Lytechinus variegatus (green sea urchin): 121412634
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Entry
121412634 CDS
T11173
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121412634
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121412634
04090 CD molecules [BR:
lvg04090
]
121412634
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121412634
CD molecules [BR:
lvg04090
]
Proteins
121412634
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_9
TIR
TIR_2
Motif
Other DBs
NCBI-GeneID:
121412634
NCBI-ProteinID:
XP_041461349
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Position
1:35215320..35218157
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AA seq
890 aa
AA seq
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MYMLLAVWPAKNALGSSSIESTRGCTLKNTSLGTKAICTHLHLKSVPQNLPSNTVIFDIS
FNMISTLFNSSFLYLPSIASLGLEHNVLSKIEHGAFEPLSHLRNLSLNGNRLVSLPSGLF
KANHFLSRLILTRNRLIYFPNNALPESKSISKLDVSGNKISFIDSCDFEPLQNCSLEILN
LKSNALHSLQFNIFSYLHSVRLLQLTANTFKNFTPSMVLGRTNITHLDVSGCNIQHIIPW
NKSNVSLENYGKISELILNSNKIRYIPDFAFWGFSQTEIVLLHNSQVSKLSNKSFCGLDK
LIILDLSYNHLTTLSWNTFSCMEILSKLKLNNNHITNVSIDLVSGLSSLSHLNLAHNSIN
DIERSNVTFPSVEYIDLSFNKFKGIRRFLMWSFPNLKILNMSNNGITNQYSPHSFLNLRH
LQELYLVNENHQDINYAFRYLVHLLVLDLSSAPLRLFNLGQFTNTLLLKRLTMHDNSLRS
ADIYHAETNRTLFWGLSSLETLDLRKNKLDMLAPGTFNPLTNLKILYLSKCTITVLSCGV
FDNLTALRTLDLRDNDIMKVPESLLQRQHHLAVLFLGNNRLESIPRILFKETTSLHSLFI
QQNRIAIIEPMTSFPTNTTLRIHAAGNPFSCTCRLSWFVKWLRSDNAELWRPKQTLCSLT
SLEAEVNSPILTFNPDKYCGIDIVMITCVTLSGLLVLVIGWVAYKQRWWLNYKLFLLKLA
IFGYEEIKQEFDEQEYEYQLNIMYNEEDQEWVDRIMKPVLQERFPHLQKVAFGDNDLNIG
MFYLNALHYVVDNSFKTVLLISYNCINDAWFLTKVRIALEQINDTKLDMVILIFLEDIQD
EDLPYLVRLFLSKNKPYMLWTDDEDGQELFWAQFEKSIRSNKAINSVIPV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgcttctggctgtgtggcctgcaaagaatgcattaggaagttccagcattgag
tcaaccagaggatgcaccctcaagaatacaagccttggaacaaaagcaatctgcactcac
ctacatctcaaatctgttcctcagaatcttccaagcaacacagtaatattcgatatctcc
ttcaatatgatatcaaccttgttcaacagttcttttttatatcttcctagcatagcttcc
ttgggacttgaacacaacgttctctcaaagatagagcatggtgcctttgagcctctgagc
cacctcaggaacttaagtctaaatggcaatagattggtttctcttccatcagggttgttc
aaagcaaaccatttcctctctagactcattcttacaagaaacagattgatttattttcct
aataatgctctacctgagtctaaaagcatatcaaaacttgatgtaagtgggaataaaatc
tcgttcattgattcatgtgactttgaaccactgcagaactgctcactggaaatcctaaat
ctaaaatctaatgccttacatagtcttcaattcaacattttctcctatttgcattcagtg
aggttgttgcagttgacagcaaacacttttaaaaactttaccccctccatggtgttaggg
agaactaatatcacacatctagatgtaagtggttgcaatatacagcatattattccatgg
aataaatcaaatgtctctctggaaaattatggtaaaatatcagaactaattttaaatagt
aacaaaataagatacataccagactttgcattttggggtttcagtcagacagaaattgtt
ttgctccacaatagccaagtttctaaattatcaaataaatcattctgtggattagataag
ttaattattctggatttgtcttacaatcacctgacaactctaagctggaatacattctct
tgcatggaaatattatcaaaacttaagctcaataataatcatatcacaaatgtatccatc
gatttggtatcaggcctatcctcactgtctcacctcaatttggcacataatagtataaac
gatattgaaaggagcaatgtgacatttccttcagtagaatatatagacctgtcttttaac
aaattcaaagggataaggaggttcttaatgtggagtttcccaaatcttaagattctgaac
atgtctaacaatggcatcactaaccagtactcgccacattcctttctcaacttgagacac
ctccaagaactctatctcgtcaatgagaatcaccaagatatcaattatgcttttcgctac
ctggtacatctactagttttagacttatcatctgctccattaagattgtttaacctaggt
caatttacaaatactttattgctcaaaaggttaaccatgcatgacaatagcctgagaagt
gcagatatataccatgctgaaactaacagaaccctcttttggggactatcctctctggag
accctggatcttagaaaaaataagcttgatatgttagcacccggtacattcaaccctttg
acaaatctcaagattctttacctgtcaaagtgtactataacggttctgagctgtggtgtc
tttgataacctcactgcccttagaacattggacctccgtgacaatgatatcatgaaggta
cctgagtccctgcttcaaagacaacatcatcttgctgttctgttcttaggtaataataga
cttgagtcaattccaagaatactgttcaaggaaaccacctctttgcacagtctgttcatt
caacaaaacagaattgccataatagagccaatgacatcgtttccaacgaatacaacacta
agaatacatgctgccgggaacccattctcctgtacatgccgcctgagttggtttgtaaaa
tggctacgttcggacaatgctgaactctggcgtccaaagcaaactctctgctcactaaca
tccctagaagcagaggtgaattccccaatactaacgtttaacccagacaaatattgtgga
attgacatagtgatgatcacatgtgtaactctttctggtcttctggtattggtgattggc
tgggtggcttacaagcaacgatggtggctaaactacaagttattcctcctaaagctggct
atctttggctacgaggaaatcaaacaagaatttgatgaacaggaatatgaataccagcta
aacattatgtataacgaagaagaccaggaatgggttgaccgcatcatgaagccagttctg
caggaaaggtttccacatcttcagaaagtggccttcggtgacaatgaccttaacattggt
atgttctacctcaacgcacttcactatgttgttgataacagcttcaagacagtccttttg
attagttataattgtataaatgatgcttggttcttgaccaaggtgcgtatcgccctggag
caaatcaatgataccaaactggatatggtcattctgattttccttgaggatatccaagat
gaagaccttccatacctagtcaggttgttccttagtaagaacaaaccttacatgctctgg
acggatgatgaggatggtcaggaactcttctgggctcaatttgagaagagcataagatcc
aacaaggctatcaatagtgttatacctgtttaa
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