Lytechinus variegatus (green sea urchin): 121412862
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Entry
121412862 CDS
T11173
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121412862
03036 Chromosome and associated proteins [BR:
lvg03036
]
121412862
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121412862
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121412862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
121412862
NCBI-ProteinID:
XP_041461561
LinkDB
All DBs
Position
1:35841777..35882295
Genome browser
AA seq
2250 aa
AA seq
DB search
MVLTIMLPKVQEGARRRKAAFTRKVSTLKSNDSNDGRPNPSDSAVIMPVRKPHMTRRIVS
SESDSSESIPDPFIKQPSQSLTPIEKTKKEKTRIGGSVTNSDSKKNNFVRLNSSTESSDF
SSKRAINALTGVSNGFVYQLMKKKEENSEEGESDCSKDAVKKCNGSLVDSTFNDEIPEGT
VIVQPEAAPDGEEDWYKSKEFRKQFPRERRERREANNQNAPQTIESVFCTACTTQVNPFD
KRTFCSHPILSVVFCKGCMEFYNSGPWKTDEDGIEEECRWCGQGGSLSCCDFCCKTFCKR
CIMRNLGRAEWNRTLSKKKWKCYVCDPSPIRELVAKCSALLLHPVKTDKKEKEKANVLVQ
KKVAKAPKNEKKVKEKLKMQDAAIAEEFLQYLVGNISNRPLFMRSLVRLKKEVPDMQRLQ
MNLSLKHIAEVKSVLGEFQACVKRQLHGDIHKSDSALDGTDPEDCDSPERRSKSQMEGIV
IKTETKEEATGQKGTAMEEKGSAMDTTAGHGVKDADIPQMDSSADGVNGCENVDEPMDTG
ETSENESSKGEREQKENDVKISENSPIADIEMDGNDGDDEDYEDKEGSEDSSNDKELIGK
EQAKTSSNKESKPDPVIEKQTGAAPDKTKMDVQENTGCAQSEDSDCPSSQQSVRKMKVTP
VSPRTRKESQAEDEEAKLMSMINESDDESSDESEGSEYSPKKSTRSPKKSPAKARNRLSR
KFSKAVKKEPVSSDDSDHHQRAKQREGPGEDSSNPEEQSGFDGIPGGESSVASQDEEVEK
GEVQKKMDSSAVTRKSKHSSESSKSESSEDISESIFVNNDRNTKSRRKRLSRKKKKCEPQ
KMDSASEEEMELKRLEGIKGLKRKRNRVSDSDGESEGVPEAQDKPEDMKAEGVVNEKEKS
DVEKESESDEAPPKKAKKVRKSPAKMDPKSREVLSTDTSSDDESESDDCSGLRWKSLNKK
SKKKGSSLDMAETLLMDELDGDDEDEDDDEEDDDDDEEVDGAGSKRSKKKAQKKAEEEEP
EEEDEDWDTNESRQNGTGGGGGGDGDGKKGGDDKKKNKKGKDKDDEEDEEEKENFEENGE
EEENGEDDETLEDESDEEGTKKSHPLLRVQISTSSEDEEDEATSKKKKKGTKGKAAPKKR
GKATKKKRRKEIDTDDYFTSSESDDVSDEKPKRKRVTRSQTATSTEDSTDDLKIPRKRRA
KKEDPGTSSDADSNKESKPKKRGGKGKKRRRIKVASDSDTEGGESKTQDESQEEKKGSDG
SSGDENDSPSKKGRKTIRRVLKKSKLQAETLAAEMEEQERRKRIEEKRKEIINEDEEKAE
KSAVVKSCILEKDKESDDVVLEVDERIVEHLKPHQAEGVQFIFDSTFESVSKAKEKGGGC
ILAHCMGLGKTLQVISYLHTIMTNDDLDVKTCLVVAPLNTVLNWEDEFEKWIGDMDSGIN
VYEMSSVKNNASRADYLDHWHKKGGVMIMGYAMYRNLSLLTHIRKKKLKAVFLKTLVDPG
PDIVVCDEGHMLKNESSAISKAMNNIKTLRRICLTGTPLQNNLIEYHCMVHFVKPNLLGT
MREFKNRFVNPITNGQHSDSTARDVKIMKRRAHVLHNLLSGCVQRKDYTALTKFLPPKHE
FVISVRLSEVQIKLYEHYLNTLSGRKDDGTKTQCTSLFADYQSLMNVWTHPRLLQLATQR
EDRNAAKREMDDFVTSEEEEDDDDSMKAFVISSDSDLEDPWKSSKKRADKSSSNSPRPRS
SRRGQNEYNSDSDDDISGEDKNDGNNSDSSVEVVKSWNTRSRAKEVGLSEGASTSAAEVY
IPPEPEKVTKWYSEFFSEEDAFKVEFSGKLVLLFEILKMAESVGEKVLVFSQSLLSLDMI
EDMLAHLDEKAQEERANGEQDLENQIGGTGSWIKGEDYFRMDGSTAAHLRRRWSEIFNDL
DNIRARLFLISTRAGSLGTNLIAANRVIIFDANWNPSHDIQSIFRVYRFGQERAVFIYRF
IAQGTMEEKIYDRQVIKQSLSQRVVDEHQIERHFTSADLSELYNFTPDRLDDPNRPERPT
PVLPKDYFLAELLKTQSKWIVKYHEHDSLLENQMEEELTEEERKEAWKDYDAEKNRQFNM
PPPRQIDPQDMERFYQEGQSILRMGEMALNYQGQPGMPPMVGASGSAPQASTMQRLLEMQ
SMYRAQIQQQQRQQQMQREQQQLQRLLMLQQARELPNSAGSSASMQQLQRIALLQQQQQQ
QRLQQQMQRERFLSQNQTNSRASSSEGKAP
NT seq
6753 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgacgatcatgctgcccaaggtgcaggaaggcgctagaaggagaaaagctgca
tttacaagaaaagtatcaacactgaaatcaaatgactccaacgatggacgtcccaatcca
tcagattcagctgtcattatgcctgtgaggaagccacacatgacccgtcgaattgtgtct
tcagaaagtgattcgtcagagtctataccagaccccttcatcaaacaaccctcccaatct
cttactcccatcgaaaagaccaagaaagagaaaacgaggataggaggctctgttacaaat
agtgactccaaaaagaacaactttgtgcgcctcaacagctcgactgaatcgtccgatttt
agtagcaaaagggcgatcaatgccctgaccggagtcagtaacggctttgtgtatcaactg
atgaaaaagaaggaggagaattcggaggagggggaaagcgattgctccaaggatgctgtc
aagaagtgcaatggatctttagtagacagtacattcaatgatgaaataccagaaggtaca
gtcattgtgcagccagaggcagccccagatggagaggaagactggtacaagagcaaagaa
tttagaaaacagtttccccgagagcggagagaaagaagagaagctaacaatcagaatgca
cctcaaaccattgaatctgtgttttgtaccgcatgtacaactcaggtcaacccatttgac
aaaaggactttctgttctcatccaattctgagtgttgtattttgtaaggggtgtatggaa
ttctacaacagtggtccctggaagacggatgaagacggcattgaagaggaatgccggtgg
tgtgggcagggtggttccctttcttgctgcgatttctgctgcaagacattttgcaagcgt
tgcatcatgcgcaacctgggaagagcagaatggaatcgtacattatcaaagaagaaatgg
aagtgctacgtgtgtgatccttcacccatacgagaactggtagccaaatgtagtgctctc
cttttacatccagtaaaaaccgataagaaggagaaagagaaggcaaatgttcttgtacag
aagaaggtggctaaagcaccaaagaatgagaagaaggtaaaggagaagttgaaaatgcag
gatgcagccatcgccgaggaatttcttcagtatcttgttgggaacatcagtaataggcca
ctcttcatgaggagcctggtacgattgaagaaggaggtgcctgacatgcaaaggctgcag
atgaatctctccctaaagcacatagccgaagtcaagtccgtccttggagagtttcaagct
tgcgtgaagaggcagctccatggcgatatccacaagagtgattctgcccttgatggaacg
gacccagaggactgcgatagccctgagaggagatcaaagtcccagatggaagggatagtg
attaagactgagacgaaggaagaagcgactgggcagaaaggaacagccatggaggaaaag
gggagtgcaatggatacaacagctggtcatggtgtcaaagatgctgatatcccacaaatg
gattctagtgctgatggtgttaatggatgtgaaaacgtggatgagcctatggacacggga
gaaacaagtgagaatgaatcatcaaagggagaacgcgaacagaaagagaatgatgtgaaa
attagtgaaaatagccccatagctgatattgaaatggatggaaatgatggcgatgatgag
gactatgaagataaagaaggcagtgaagattcttcaaatgataaagaactgataggaaag
gagcaggccaaaactagttcgaacaaggagagtaaacctgatcctgtaattgagaaacaa
acaggggctgctcctgataaaacgaaaatggacgttcaagaaaatactggttgtgcccag
agtgaggactctgattgtccttcaagccaacaaagtgtacgtaaaatgaaagtaactcct
gtgtctcctagaacaaggaaagaatcacaagctgaggatgaagaagctaaactgatgtct
atgatcaatgaatctgatgatgaatctagtgacgagagtgagggatcagagtatagtcct
aagaaatcaactaggtctcctaagaaatctcccgcaaaagcaaggaataggctatctagg
aaattctccaaggctgtaaagaaagagcctgtctctagtgatgactctgatcaccaccag
agagctaaacaaagagaaggacctggtgaggactcgagtaatcctgaagaacaatctggg
tttgatggaattcctggtggagaatcttcagtagcctctcaggatgaggaagtggagaag
ggagaagttcagaaaaagatggactcatctgctgttactagaaaaagcaagcatagttct
gaatcaagtaaaagtgaatcctctgaggacatttctgagagtatttttgtgaacaatgat
cgtaataccaaatctcgtagaaaaagattaagcaggaaaaagaagaaatgtgaaccgcaa
aagatggactcagcttctgaggaagaaatggaattgaagagacttgagggcattaaaggt
ttgaaaagaaaacgtaaccgtgtcagtgacagcgatggtgaatctgagggtgtacctgaa
gcccaagataagcctgaagatatgaaagcagagggtgttgtgaatgagaaggaaaagtct
gatgttgagaaggagtctgaatcagatgaagctccacccaagaaagcaaagaaggtccga
aaatctcctgcgaagatggaccccaagagcagggaagttcttagcactgatacttcctcc
gatgatgagagcgagagtgacgactgttctggactgcgatggaagagtctcaacaagaaa
agcaagaagaagggtagtagcctagatatggcagaaacccttctgatggatgagttagat
ggtgatgatgaggatgaagatgatgatgaggaggatgatgatgatgatgaagaagtagat
ggtgcgggatccaagagaagtaagaagaaggctcaaaagaaggcagaagaagaagagcct
gaagaagaagatgaagactgggataccaatgaaagtagacagaatggaactggtggtggt
ggtggtggagatggggatggcaagaaaggaggagatgataagaagaagaataagaaggga
aaggacaaagatgatgaggaggatgaagaagagaaggagaattttgaagaaaatggagag
gaagaagaaaatggtgaagatgatgaaactttagaggacgaatctgacgaagaaggtacc
aagaaatcacatcccttgcttcgtgtccagatctctacatccagcgaggatgaagaagat
gaggctacatcaaagaagaaaaagaaaggcacaaaggggaaagctgctccaaagaaacgt
ggcaaagcaacaaaaaagaagaggaggaaagagattgacaccgatgattacttcacatca
tcagaatcagatgatgtttctgatgagaagccaaagaggaaaagggtgacaagatctcag
actgcaacctcgacagaagactccactgacgatctcaagatccccagaaagaggagggcc
aagaaggaggatcctggtaccagctctgatgcagactccaataaagaatctaagccaaag
aaacggggaggcaaagggaagaagaggaggaggataaaagttgcttctgactcagacacc
gaaggaggtgaatccaagacacaagatgagagtcaagaagagaagaagggctctgatggt
tcaagcggggatgagaatgacagtccaagtaagaaaggacgtaagacaattagacgggtg
ctgaagaagagtaagcttcaagctgagactctagcagctgaaatggaagaacaggagaga
cgaaaaagaattgaagagaagaggaaagagatcatcaatgaggacgaagagaaagcagag
aagagtgctgttgtcaagtcctgcatcctagagaaagacaaggaatctgatgatgtggtg
ttggaggtggatgaacgcattgtggagcatctgaaacctcaccaagctgaaggtgtccag
ttcatctttgacagcacctttgaatctgtctctaaagccaaagagaaaggtggaggatgc
atcctggctcactgtatgggattgggtaaaactctacaggttatctcctaccttcacact
ataatgaccaatgatgacttagacgtgaagacatgtctagtggtagcacctctgaatacc
gtactcaattgggaagatgaatttgagaagtggattggagatatggacagtggtattaat
gtgtatgagatgagttcggtgaagaacaatgctagcagagctgattatcttgatcattgg
cacaagaagggtggtgtaatgatcatgggctatgccatgtacaggaatctatcccttctc
actcatatacgcaagaaaaaattgaaggcagtcttcctgaaaacccttgtagatccaggt
ccagacatagtagtatgtgatgaaggtcacatgttgaagaatgagagttcagccatctct
aaggcgatgaacaacatcaagacattgagaaggatatgcttgactggcacaccgctgcag
aacaaccttatagaatatcattgcatggttcactttgtgaagccaaacttgcttggtaca
atgagagagtttaagaatcgctttgtgaatccaataaccaatggacagcacagtgactct
actgctagagatgtcaagattatgaagaggagagctcatgtacttcataatcttctttca
ggctgtgtacagaggaaagactacaccgccctaaccaagttcttgccgcccaaacacgag
tttgtgataagtgtgaggttatccgaagtccagataaagctgtacgaacactacctgaac
acgctgtctggacgtaaagatgatggtaccaagactcagtgtaccagtctctttgctgat
taccagtctcttatgaatgtatggacccatccaaggcttctacaacttgcaacacagaga
gaagatagaaatgctgctaaacgagagatggatgattttgtcacttccgaggaggaggag
gatgatgatgacagcatgaaggcatttgtaatctcatcagacagtgacctggaagacccc
tggaagtcgtctaagaagagagctgataagtcaagcagcaattctcctcgaccaagatca
tcacgtcgcgggcaaaatgagtataacagcgatagtgatgatgatatcagcggagaggac
aaaaacgatggaaataactcggacagtagtgtggaggtagtcaagtcttggaacacgagg
agtagggccaaggaggttggactgtcagaaggggcatctacgtctgcagctgaagtatac
atccccccagaacccgagaaggtcactaagtggtactctgagttcttctctgaggaagat
gccttcaaggtggaatttagtggaaagctggtccttctctttgagattctcaagatggct
gagagtgttggagagaaagttcttgtgttcagtcagagtcttctatctcttgatatgatt
gaagacatgttggctcatctagatgaaaaagcacaggaggaaagagctaacggagaacaa
gatttagaaaaccagattggaggaactggatcttggatcaaaggagaggattatttcaga
atggatggctccactgcagctcatctgagaagaagatggtcagagatctttaatgatctt
gataatatacgagcacgtctgttcctgatctcaacccgagctggatccttaggaaccaat
ctcattgccgccaaccgtgtgatcatctttgatgccaactggaatcctagccacgacatt
cagtctatattcagagtgtaccgttttggtcaagagagggcagtcttcatctataggttt
attgcacagggtacaatggaggagaagatctatgacagacaggtcattaagcagtcacta
tcacagagagtggttgatgaacaccagattgaacgtcacttcacgtctgccgatctctca
gagctctataacttcacaccagacaggctagatgaccccaacagacctgaaagacccact
cctgttctacctaaggattatttcctggcagaactactcaagacgcagagcaagtggata
gtgaaatatcacgagcatgattcattattggagaaccagatggaagaagaactgacagag
gaggagaggaaggaggcatggaaggattacgatgctgagaagaacagacagtttaacatg
cccccaccaaggcaaatcgatccacaagatatggagagattctaccaagagggacagtct
attctgcgcatgggtgagatggcattgaactatcaaggtcaacctggtatgccacccatg
gtaggagccagcggtagtgcaccacaggcatctactatgcagcgcctactggagatgcag
agtatgtatcgcgcacaaattcagcaacagcaacggcagcaacagatgcagcgggagcag
caacagcttcaacgactgctgatgctgcaacaagcaagagaactgcccaactctgccggc
agctccgccagcatgcagcaactgcagaggatcgctctcttgcagcaacagcagcagcaa
cagcggttgcaacaacaaatgcaacgggaacggttcctcagtcaaaatcaaacgaattcc
agggcatcatcttctgaaggaaaagccccttga
DBGET
integrated database retrieval system
