Lytechinus variegatus (green sea urchin): 121412935
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Entry
121412935 CDS
T11173
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121412935
Membrane trafficking [BR:
lvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121412935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
ATG2_CAD
FAM91_N
Motif
Other DBs
NCBI-GeneID:
121412935
NCBI-ProteinID:
XP_041461632
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All DBs
Position
4:complement(29471076..29525560)
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AA seq
1109 aa
AA seq
DB search
MVLESLLSSVLNKYLSKYIRNLDCHNLELGIFDSSLELTDLEIKPEALAQLNLPIEVVAG
HIGRICIDFSWTGLFSEPVVVNVEDLLVLVSPVADRPYDEEKARNAENAAKQQKLAAIEA
SKKAASSSDTKSKSQDLSFREKLTAAIINNIQVNVSNIHIRYEDNSTYPGKPFAFGVALH
RISAQTTDEEWESTQLDATAIIMRKVLEAIGFSAYWNTSVQHPVSGYVRSGQWKDILRSS
ILSHEIKGQPFDFIVEPVTTTARLTFDKSDPPTDYTNPQVMLDILTSALTISLSRQQYLN
VIDLAQSIQLLAVNERYRKNRPGVGVRGNAKKWWHYAYKSILEEHIRPWSAPRIEAHLEV
YNTYWQKYKQKLVLQEAKQSTEALDRKLRGLEDRLDLTNIIAGRERAKTEFIREKPERDK
ARRKKKAEETNWFMRLLGYGDEDEEEEEEDDDEDLWSKLTEEEKAKVYAGIGYEESREGS
SVDASPIPVQYVRTKVSFLLDRCTVSLKNRNGTILRGLLQNVQAGVQLRPVNNAVHVMLS
TDAMRVEGALPNRELVPLISSEKLHPDTSMTSQVFSVDFETSPLTVPADMALAITSEPVD
VVYNQYAVSELIGFLKVDSLDLSGLKSAAYAGVQELAKASQNNLLYAIQHHKTIQIDFDV
KSPNIIIPEHGSLDLGGYLLILDLGSLRVNSELQKDTTALEDATPTEIEARLYDKFVIRI
TDIQVLLVEPGADWREALQARESRHHILPGLCLQINTFISAKPDYKQLPQHKIEAVLPSL
KLLISDSKIQALVKFAKNVPLPEVQPSTNDIPYRKPMPSIDVKAVKSEMSTAALRRTKRL
MLWSRKTRIAGTTLPTRKVTNVEELDSAPAKPPSPPVAPLKGDVYYTASDHSDEDIQHWA
ASSQVPRFDDNDSATNQTHTLLRFVIREVVVSISKPSTSILPSPASSGDRSTSPAPPSPT
ETGESEYLSLRIDSVCVDVALSTYGLALHMGLRGIQVIDKFHIGPDGTYLHLLSSAATSE
LFSVLYRKVDSKCPDFNGYYGSTEQAVVVNFSALNILFHRTAVLFLKKSITEMIASLSSI
SLTEKVGSSLTSDPEPTPPSTETEQGLPA
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggttttggaatccctgttatccagtgtgctcaacaagtacctgagcaaatacatcagg
aatttggactgtcataacctcgaacttggcatctttgacagcagtttagaactcacagac
ctagagataaagccagaggcattggctcaacttaatcttccaatagaagttgttgctggt
catataggaagaatatgcattgacttttcatggaccggccttttctccgagccagtagtg
gtcaacgttgaagacctcttggtgctggtcagtccggttgctgaccgtccatacgatgaa
gagaaagcaagaaatgccgagaatgcggccaagcagcagaagcttgcagccattgaagca
tccaagaaagctgcttcaagctcagacacaaaaagcaagagtcaagatctgtcattcaga
gagaaattaactgctgcaatcataaacaatatacaggtgaatgtctccaacatacacatt
cgatatgaagataacagcacttaccctgggaagccatttgcatttggtgttgctctgcac
cgcatctcagcccagacaactgatgaagaatgggaatcaactcagctggatgctacagcc
atcatcatgagaaaggtattggaagccattgggttttcagcctattggaacacctcagtg
caacacccagtctctggctatgtcaggagtgggcagtggaaggatatccttagaagttcc
atccttagtcatgagatcaaaggtcaaccatttgacttcatcgttgaaccagtcaccacc
acagccaggctgaccttcgacaagtccgaccctccgacggactacaccaaccctcaggtc
atgctggacatcctcacgtccgccctcaccatctcgttgtcacggcaacagtatctcaac
gtcattgacctcgctcagtctatccagctcctggctgtcaacgagagatacaggaagaac
cggccaggtgtcggggtccgaggcaacgcaaagaaatggtggcactatgcatacaaatcc
attttggaggagcacatccgtccctggtctgcccccaggatagaagcccacctcgaggtc
tacaacacctactggcagaagtacaaacagaaactagtcttgcaggaagcaaaacagagc
acggaggctctggacaggaagttaaggggtctggaggatagactagacttgactaacatc
atcgcaggcagagaaagggccaagacagagttcatcagggagaaaccggagagagacaaa
gcaaggaggaaaaagaaggcggaggaaaccaactggtttatgcgtctcctaggttacggg
gatgaagatgaagaggaggaggaagaagatgatgatgaagatttatggtctaagttgaca
gaggaagagaaggccaaggtgtatgctgggataggatatgaagagtcaagagagggcagc
agtgtggatgcaagccccatccctgtacagtatgtaagaacaaaagtgagcttcctgctt
gatcggtgtacggtatccttgaagaatcggaatggaaccatactcagagggttgctacag
aatgtacaggcaggagtacagcttagaccagtcaacaatgcagtccatgtgatgctgagt
acggatgccatgcgggtagagggcgccctccccaacagagagctggtgcctctgatctcc
tcagagaagcttcatccagacacctccatgacgtctcaggtcttcagtgtggactttgag
acctccccgttgacagtccctgcggacatggctctggccatcacctcggaacccgtggac
gtggtgtacaatcagtatgcagtctcggagctcatcggcttcctcaaggttgatagcttg
gatctgtcgggtctcaagtccgctgcttacgctggtgtccaggagctggccaaggcctcc
cagaacaatcttctctatgcaatacaacatcataaaacaatccagattgactttgatgtg
aagtctccaaacatcatcattccagagcatggttcccttgacctggggggctatctactc
atcctagaccttggtagtctacgggttaacagtgagctgcagaaggacacaacagccctg
gaagatgcaactcctacagagatagaagcaagactctatgacaagtttgtcatcagaatc
acagatatacaagtcctacttgttgagccaggtgcagactggagggaagcgcttcaggcc
agagagtctagacatcatattcttcctggtttatgccttcagatcaacactttcattagt
gctaagccagactacaaacaacttccacagcacaaaatagaagcagtactaccatcactg
aaacttttaatatcagactccaagatccaagctcttgtcaagtttgccaagaatgttcca
cttccagaggtccaaccaagcaccaatgacattccatacaggaaaccaatgccatccatt
gacgtcaaagcagtgaagtctgagatgtccacagctgccttgcgccgtaccaagagactc
atgctatggagtaggaaaaccaggattgctgggacaactctacctactaggaaggtcacc
aatgtagaagaactagatagcgcccctgccaaaccaccttcccctcctgtagccccactc
aaaggtgatgtatattacacagcatcggatcactccgatgaggatatccaacactgggca
gcctcctcccaggttccaagatttgatgacaatgattccgctaccaaccagactcacaca
cttcttagattcgtcatcagagaggtggtggtgtccatttctaagccaagcaccagcata
ctaccctcaccagctagcagcggagataggagcaccagtccagctcctccctcccccacc
gagactggagagtctgagtaccttagccttaggatagactctgtgtgtgttgatgtagcc
ctgagtacctacggcctggctctacatatgggactgaggggaatccaagtcattgataag
tttcatataggtccagatggcacgtatcttcatttgctcagctcagcagcaacatcagag
ttattttctgtcctctacagaaaggttgattcaaagtgtcctgatttcaatggctactat
ggctctacagagcaagccgtggtcgtcaacttcagtgctctcaatatcctcttccacaga
acagctgtgctcttcctgaagaaatctatcacagagatgattgcaagcctgagttctatc
tctctaactgagaaggttgggtcatcactgacatcagaccctgaacctaccccaccaagt
acagaaacagagcaaggtttaccagcataa
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