Lytechinus variegatus (green sea urchin): 121413177
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Entry
121413177 CDS
T11173
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121413177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121413177
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121413177
Membrane trafficking [BR:
lvg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121413177
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121413177
Exosomal proteins of colorectal cancer cells
121413177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
121413177
NCBI-ProteinID:
XP_041461875
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Position
1:37302783..37323153
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AA seq
383 aa
AA seq
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MDRFEWTNDALLPRETLVKQQHGIRLYDGNQKTQFDHGIAVLTTHRLMWKDMQGRGVIAF
HLSLIIYVEKFPDSKGKGSVVIHLQPATPNKNPGPVMSSPNTYVKLGCREGGEEQFFTCL
TEQLSRKMWQYVPAAQQSKPTAQPRSIHKGIVGIERKLEEKRKATDTNITKAFEDLDKLM
TKAKEMVDLTKTIANKIKEKQGDITEDETVKFKSYLLSLGIANPVTRETYGSGLKYHEEL
AKQLAEVLISPVEDNGGMMAITDVYCRINRARGMELLSPDDLIDACQQFERLRLPLRLRR
FTSGVLVLESVSKGEEAAIDQTAELLTEKASLSADELAQIAGVSVMLAKGRLLAAEEVGK
ACRDESVEGLRFYPNLFLNPPSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaccgattcgagtggacaaatgatgcgttattacctcgagagaccctcgtaaagcaa
caacatgggattcgtttgtatgatgggaaccagaagacccagtttgaccatggaatagct
gtattgacaactcacaggttgatgtggaaagatatgcaaggcaggggagtgatcgccttt
cacctttcactgatcatttatgtagagaagtttccagattctaagggcaaagggagtgta
gtaattcacctccagccagctacacccaataaaaaccctggccccgttatgagcagtcca
aatacatacgtcaaactaggatgcagagagggaggagaagaacagtttttcacctgcttg
actgagcagctgtccagaaagatgtggcagtatgtgccagcagcacagcaatccaaacca
acagcacagcctcgctccattcacaaaggtattgtgggaatcgagaggaaattggaagag
aaaagaaaagcaacagatacaaatataaccaaggcatttgaagatttggacaagcttatg
actaaggcaaaagaaatggtagacttgactaagacaatagctaacaagatcaaggagaaa
caaggagatatcactgaagatgagactgtgaagttcaagtcctaccttctcagccttggt
atagccaacccagtcacaagagaaacctatggctcaggtctcaagtatcatgaagaatta
gccaaacaacttgcagaggtcttgatatcacccgtagaggataatggaggaatgatggcc
atcacagatgtgtattgtagaataaacagagctagaggaatggagctgctttctcctgat
gacttgatagatgcatgccaacagtttgaaaggcttcgacttccattgaggttacgaagg
tttacaagtggagtcttagtccttgaatccgtgtcaaagggtgaagaggctgcgattgat
caaacagctgaattgcttacagagaaggcatctttaagtgctgatgagcttgcccagatt
gctggagtctctgtaatgttagccaaaggaaggttactggctgccgaggaagtagggaag
gcatgccgtgatgaatccgtggagggacttcgattctatcctaatctattcctcaacccc
ccatcgagataa
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