Lytechinus variegatus (green sea urchin): 121413283
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Entry
121413283 CDS
T11173
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121413283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121413283
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
121413283
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
121413283
NCBI-ProteinID:
XP_041461985
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All DBs
Position
4:complement(7361719..7362986)
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AA seq
311 aa
AA seq
DB search
MGRPGFSPRGSFRGGGGDRGGRGRGGFGGGRGGFGGGRGGGGSRGGFGGRGGPRGRGGPR
GRGGRGGRGGMRGGARVVIEPHRLQGVFIARGKEDALVTKNLVPGESVYGEKRISIEEGE
KKLEYRAWNPFRSKLAAAILGGVDHIHMKPGSKVLYLGAASGTTVSHVSDLVGPEGLVYA
VEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDCVFADVAQPDQARIVAIN
AHNFLKNEGHFVISIKANCIDSTAQPEAVFAGEVKKLQAEKLKPQEQLTLEPYERDHAVV
VGVYRAPPKKK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaccaggattctcaccacgaggtagcttccggggaggtggaggagatcgagga
gggcgtggccgagggggctttggcggaggacgagggggattcggcggaggacgaggggga
ggcggcagcagaggaggatttggtggtcgaggtggaccaagagggcgaggtggcccccgg
ggtagaggaggaagaggtggtcgcggtgggatgcgaggtggtgctagggtcgtcatagaa
cctcacagactgcaaggtgtatttattgccagaggcaaggaggatgcattggtcaccaag
aacttggtgcctggggaatcagtctatggagagaagaggattagtattgaggagggagag
aagaagttggagtacagagcctggaaccctttcagatcgaagctagcagcagccatcttg
ggtggcgtagatcacatacacatgaaacccggaagcaaggttctgtaccttggtgctgca
tcagggacgacagtgtctcatgtttcggatctggttggaccggaggggttagtttatgca
gtagagttctcacatcgatcagggcgagatctcatcaacgtagcgaagaaacgaactaac
atcattcctattatagaagacgccagacatccacacaaataccgaatgttggtcggtatg
gtagactgtgtctttgctgatgtcgcacagccagaccaagccaggatagtcgccatcaac
gcccataacttcctcaagaatgaaggccactttgtcatctcaattaaggccaactgcatt
gattccacggcccaacctgaagccgtgtttgccggagaggtcaagaaacttcaagcggag
aaactcaagccccaggagcagttgacccttgaaccgtacgagagagaccacgctgtcgtc
gtaggagtatacagagcaccaccaaagaagaagtga
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