Lytechinus variegatus (green sea urchin): 121413311
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Entry
121413311 CDS
T11173
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
lvg
Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121413311
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121413311
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
DSE1_N
Beta-prop_WDR90_POC16_2nd
TPR_19
TPR_11
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
NBCH_WD40
ETO1_C
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
CFAP70_TPR_C
PAC11
Corazonin
Motif
Other DBs
NCBI-GeneID:
121413311
NCBI-ProteinID:
XP_041462024
LinkDB
All DBs
Position
4:complement(9073529..9091955)
Genome browser
AA seq
725 aa
AA seq
DB search
MDTRPSSVLHHARRREIRDISVRRFQQIHHVNETLINRLGLEHELEGHNGCVNCLEWNES
GSLLGSGSDDLTAMIWDPHRRRKLTTIRTGHLGNIFSLKFLPNSQDETIATGAADCKVRV
HNVPRGETTYAFSCHAGRVKRLAVVPNLPYMFWSAGEDGTIRHFDLRSPHLCNDSCNNVL
INLNYYTGKHGECKCLAINPYRPEQLAVGASDPFIRLYDIRMLNPHAVHFSREEVLRSAW
RTPAPEPDDHGEVPRGCVQYFIAGHLPVKEEERGRRYRSLVATYVTFGPTGHELLANLGG
EQVYLFDVNNRQKPRLYNVGDYPAPSANGYCTNGVCKDVQQHIGEALSSNGSSVDPANGM
NGLYQPTNGMKKEDSDARAGYSHHSERHQSRSHASSSRRKGSTKELPPKIEAWKHEANKF
YCDKKDYTSAIRLYNQAISMCSDHAILFGNRAAAYMKRGWDGDIYAALRDCHSALSLDAK
HRKAHFRLARCLLQLTWSNEAHQCLQSFKTKFPEYAKYSECQALERDITAAVFSNSDKRT
NEAPSDQDWQDSPPDGPRTSSSEAVEPKEKELRNDAYDYTERYCGHCNTTTDIKEANFFG
SNGQYIMAGSDDGSFFIWDRKTTNIARVLRGDDSIVNCLQPHPSSCLLATSGIDPVVRLW
SPRPEDGSSNDRCITEPDTAATANQRRMKADPLEVMLMNMGYRITGISTDGSDDEPDAPM
PCRPS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaggccatctagtgtcttacatcatgcgaggagaagagagattagggatatt
tctgtaaggagatttcaacagattcatcatgtaaatgaaacactcatcaatagacttggc
ctggaacatgagttagagggtcacaatggatgtgtgaattgtttagaatggaatgaatca
ggatcattgttaggaagtggttcagacgatcttactgctatgatatgggatcctcacaga
aggagaaaattaacaactatccgtactggtcaccttggaaatatcttttctcttaaattc
ttgccaaattctcaagatgagaccatagccaccggtgctgctgactgcaaagtccgggtt
cacaacgtgcctaggggtgagactacgtatgcctttagctgccacgcaggtcgtgtcaaa
agactcgcagtggtgcccaaccttccctacatgttctggagtgcaggagaagatgggacg
ataaggcattttgatctgagatctccccacctgtgtaatgatagctgtaacaatgttctt
attaatctcaactattacactggcaaacatggggaatgcaagtgccttgcaatcaaccca
tacagacctgaacagctagcagttggggctagtgatccattcattaggctttacgacatt
agaatgttgaaccctcatgccgttcacttctcaagagaagaggtcctgaggtcagcgtgg
aggaccccggcccctgaaccagatgaccatggtgaagtgccaaggggatgtgtgcaatat
ttcatagcaggtcatttacctgtcaaggaggaggagagagggagaagatataggtcactg
gttgcgacctatgtgacctttggccctacaggtcatgaacttttagcaaaccttggagga
gaacaagtatatctgtttgatgtaaacaataggcagaaaccaagactgtataatgttggt
gattatccagctccaagtgccaatggatattgtacaaatggtgtttgtaaagatgtccaa
cagcacataggggaagcattatcatcgaatggatcatcagtagacccagccaatgggatg
aatggtctctaccagccaaccaatggcatgaagaaggaagactcggatgcgagggcgggc
tactcacatcacagtgagaggcatcagtctaggtcacatgcatcatcaagtaggagaaaa
ggctcaaccaaagaacttcctcctaagatagaagcatggaagcatgaagcaaacaagttc
tactgtgataagaaggattatacctcagcaatccgtctctacaatcaggccatcagcatg
tgttcagaccatgccattctctttggcaacagagcagcagcttatatgaaacgaggatgg
gatggagatatttatgcagctcttcgtgactgccacagtgccttgagcctcgatgctaag
catcgtaaggcccatttccgtcttgcccgctgcttgcttcagctcacctggtccaacgag
gcccatcagtgtctgcagtcattcaagaccaagtttccggagtatgccaagtattctgag
tgccaggccctagagagggacatcactgctgcggtcttttcgaactctgataaacggacg
aatgaagctccgagtgaccaagactggcaagattcgccaccggatggtccgaggacgtca
agcagcgaggcagtagaacctaaggagaaagaactcagaaatgatgcatatgattataca
gagagatactgtggacactgcaatacaaccactgatatcaaggaagcaaacttctttgga
agcaacggtcagtacatcatggctggttcagatgatggctcattctttatctgggatcgg
aagaccactaacatcgctcgcgtcctcagaggtgatgattccattgttaactgtcttcaa
cctcatccatcgtcgtgtctcctagcaaccagtggcattgaccccgtcgtaaggttatgg
agccctcgacctgaggatggtagcagcaatgaccgttgcatcacagaacctgacacagca
gcgacagccaaccagaggcggatgaaagccgaccccttggaggtcatgttaatgaacatg
ggttaccgtatcacaggtatctctacagacggatctgacgatgaacccgatgccccaatg
ccgtgcagacctagctag
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