Lytechinus variegatus (green sea urchin): 121413394
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Entry
121413394 CDS
T11173
Name
(RefSeq) tubulin alpha-1 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121413394
09142 Cell motility
04814 Motor proteins
121413394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121413394
03036 Chromosome and associated proteins [BR:
lvg03036
]
121413394
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121413394
04147 Exosome [BR:
lvg04147
]
121413394
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121413394
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121413394
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121413394
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121413394
Exosomal proteins of other body fluids (saliva and urine)
121413394
Exosomal proteins of colorectal cancer cells
121413394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121413394
NCBI-ProteinID:
XP_041462128
LinkDB
All DBs
Position
4:11763059..11765505
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLAVYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSVDAEGEEEEGEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctatccacgtcggccaagccggagtccagatcggtaatgcctgc
tgggagttgtactgccttgagcacggcatccagcctgatggtcagatgccctcagacaag
accattggaggtggtgatgactccttcaacaccttcttcagtgagactggggctggcaag
cacgtcccccgtgccgtcttcgtcgatctcgagccaaccgtagtcgatgaggtccgtacc
ggaacctaccgtcagctcttccaccctgagcagctgatcaccggcaaggaggatgctgcc
aacaactacgcccgtggtcactacaccgtcggaaaggaactcatcgatatcgtcctcgac
aggatcaggaagttggctgaccagtgcacaggtcttcagggattcctcatcttccacagc
ttcggtggtggcaccggctctggcttcacctccctgctcatggagcgtctgtctgttgat
tacggaaagaagtccaagctcgagttcgccatctaccccgctcctcagatctccaccgct
gtcgtcgagccctacaactccatcctgaccacccataccaccctcgagcattccgactgt
gccttcatggtcgacaacgaagccatttacgatatctgccgtcgcaaccttgacatcgag
cgtcccacctacaccaacttgaaccgtctcatcggacagattgtctcctccatcaccgca
tctctccgattcgatggtgccctcaacgtcgatcttaccgagttccagaccaacttggtg
ccctacccacgtatccatttccctcttgcagtctatgccccagtcatctctgccgagaag
gcctaccatgagcagctgactgttgccgagatcaccaacgcctgcttcgagcctgccaac
cagatggtgaagtgcgatccccgtcatggcaagtacatggcctgctgtctcctttaccgt
ggtgatgtcgtccccaaggatgtcaacgctgccatcgctacaatcaagaccaagcgtacc
atccagttcgtcgactggtgtccaactggtttcaaggtcggtatcaactaccaaccaccc
accgtcgttcccggtggtgatcttgccaaggtccagcgtgccgtctgcatgttgagcaac
accaccgccatcgccgaggcatgggctcgtcttgaccacaagttcgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagagggtatggaggaaggagaattctccgag
gctcgtgaggatttggccgctctcgagaaggactacgaagaagtcggaaccgactccgtc
gatgcagagggagaggaggaggaaggtgaagaatattag
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