Lytechinus variegatus (green sea urchin): 121413409
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Entry
121413409 CDS
T11173
Name
(RefSeq) tubulin alpha-3 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04517
IgSF CAM signaling
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121413409
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121413409
09142 Cell motility
04814 Motor proteins
121413409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121413409
03036 Chromosome and associated proteins [BR:
lvg03036
]
121413409
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121413409
04147 Exosome [BR:
lvg04147
]
121413409
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121413409
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121413409
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121413409
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121413409
Exosomal proteins of other body fluids (saliva and urine)
121413409
Exosomal proteins of colorectal cancer cells
121413409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121413409
NCBI-ProteinID:
XP_041462147
LinkDB
All DBs
Position
4:12363163..12375150
Genome browser
AA seq
452 aa
AA seq
DB search
MRECLSLHLGQAGVQMGNACWELFCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HIPRAVYVDLEPTVIDEVRTGTYRQLFGPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RVRKLADLCSGLQGFLVFHSFGGGTGSGFTSLLMERLSIDYGKKCKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGSLNVDLTEFQTNLVPYPRIHFPQVIYAPVVSAEKAYHEQLSVSEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIASIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNNTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVDGEEEAEEDDEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtctatcccttcatctcggccaagccggtgtccagatgggcaatgcttgt
tgggagttgttttgtctcgaacatggcatccagcctgatggtcagatgccctcagacaag
accatcggaggtggtgatgactccttcaacaccttcttcagtgagactggagccggcaaa
catataccaagagcggtttatgtggatttagagcctacagtcattgatgaagttcgaacc
ggtacttaccgtcaacttttcggtcccgaacaactcataaccggtaaggaggatgctgcc
aacaactacgcccgtggtcattacacggtcggcaaggagatcattgacctcgtcctcgac
agggttaggaagctggccgatctgtgttctggactccaggggttcttggtctttcatagt
ttcggtggaggcacgggatcaggtttcacatcgcttctcatggaacgactttcaatcgac
tacggcaagaaatgcaagctcgagttcgccatctaccccgcacctcagatctcaactgcc
gtggtggaaccttacaactcaatcttaacaacccataccacactggaacactccgactgc
gccttcatggtcgacaacgaggccatctacgatatctgccgtcgaaaccttgacatcgag
cgtccgacgtacacgaatctcaaccgcctgatcggacagattgtatcttcgattacggcg
tcgttacgcttcgatggctctttaaacgtcgacctgacggagttccagaccaatctggtg
ccctatcctcgtatccactttccccaagttatctacgccccggttgtttcggctgagaag
gcatatcatgagcaactaagcgtttcagagatcaccaactcatgctttgagccagccaac
cagctagtcaagtgtgatcctcgtcatgggaagtacatggcctgctgtctcctgtaccgt
ggtgatgtcgtccccaaggatgtcaacgccgcaattgctagcatcaagaccaagcgcacc
atccagtttgtcgactggtgtccaactggcttcaaggtcggtatcaactaccagccaccc
actgtcgtccctggcggcgaccttgctaaagttcaacgcgccgtctgcatgttgagcaac
aacacagccattgccgaggcatgggctcgtctcgaccacaagttcgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagagggtatggaggaaggagagttctccgag
gctcgtgaagatttggctgctctcgagaaggactacgaagaagttggtgttgactcggtc
gatggtgaagaggaggccgaagaagatgatgaatattaa
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