KEGG   Lytechinus variegatus (green sea urchin): 121413486
Entry
121413486         CDS       T11173                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121413486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lvg03041]
    121413486
   03400 DNA repair and recombination proteins [BR:lvg03400]
    121413486
Spliceosome [BR:lvg03041]
 Complex B
  Other components
   Prp19 complex
    121413486
 Complex C
   Prp19-CDC5 complex
    121413486
DNA repair and recombination proteins [BR:lvg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    121413486
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect RapZ-like_N
Other DBs
NCBI-GeneID: 121413486
NCBI-ProteinID: XP_041462242
LinkDB
Position
4:15688177..15703121
AA seq 815 aa
MPRIQIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKK
TEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTAAQCLERYEILLDQAQKKEGDGDTMDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEVNKKRRKKRGVDYNAEIPFEKKPAPGFYNTADEVVAPVDPNFK
RLRREDMDQARRDEIEERERKKDRQKLKKRKENDLPGAIAMTNKMAEPMKKRSKLVLPTP
QISDAELEEVVKLGQASENARQIAEEGAVNGASDALLSDYTMTPGPANLRTPRTPATHDT
VLQEAQNILALQNVETPLKGGMNTAVGSSDFDGITPKRQATQTPNMAFNTPFRTPGHESQ
ASLTPRMTPRMGTGGGQTPGQTPLRDKLNINPEEALMEFDSVHSAKQQQRELKASLRRGL
SSLPAPRNDFEIVIPENDEKLLEEPQDNSNFIEDASDVENRRLAKLAEEREKELRSRSQP
LQRGLPRPVDINTSILRPKDLETPITELQKAEEMIKVEMITMLHYDALKNPVGDQPGMKK
GDKPTSKTNPAAHAAYLEHHPYHQYEEEDMKKANELLKAEMEVVKTGMAHGDLPKEAYTQ
VWEECLGQVLYIPSKNKYTRANMASKKDRIESAEKKLESNRGVMTREAKRAAKLEKKLKI
LLGGYQSRAQGLTKQLAEIQEEVEQAYVELCTFQELQSNEDIAIPKRMESLREDVKRQSD
RERELQQRYSDLMFEREMLSAQITKLEMQQSGPKF
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgccacgaatccagattaaaggaggtgtttggaggaacactgaagatgaaatcctcaaa
gcagctgtgatgaaatatggcaaaaaccagtggtctagaattgcatcactgttacacagg
aaatcagctaaacaatgcaaagcaagatggtttgaatggctggatccaagtatcaagaaa
acagaatggagtcgagaggaagatgagaagctcctacacctggctaaactcatgcccacc
caatggaggaccattgcacccattgtgggacgtactgcagctcagtgtctggagagatat
gaaatcttacttgatcaagcgcagaagaaggagggtgatggggatacaatggatgatccg
aggaagctgaaaccaggagagatagatcctaacccagagactaaaccagctagacctgat
cctattgatatggatgaagatgaacttgagatgttatcagaagcccgtgctcgtctagcc
aacacgcagggtaagaaggccaagcggaaggctcgtgaaaagcagcttgaggaagcgcga
cgtcttgcagctcttcagaagcgtagggaactccgggcagcaggtatcgaggtcaacaag
aagaggcgcaagaagcgcggcgttgattacaatgctgagattccgtttgagaagaagcca
gcaccagggttttacaacacagctgatgaagtggtcgcacctgtggatccaaacttcaag
cggcttaggagagaggacatggaccaagctcgtagagatgagattgaagagagagaacga
aagaaggatagacagaagttgaagaagaggaaagagaatgatttgcctggagctatcgct
atgacaaacaagatggctgagccaatgaagaagcgtagcaaacttgtcttgcctactcca
caaatatctgatgctgagttagaagaggttgtgaagcttggtcaggctagtgagaatgcc
cgtcagatcgctgaggaaggagcagtcaatggtgcttcggatgctcttctttcagactac
acgatgaccccaggaccagctaatctcagaacacctcgcactcctgctacacatgataca
gtacttcaggaggcacagaacatccttgcactgcagaatgttgaaacgccattgaaagga
ggtatgaacacagcagtaggaagcagtgattttgatggtatcacgcctaagagacaagct
acacagacacctaacatggcgttcaatacaccattcagaacaccaggtcatgagtcacaa
gcaagtttgacccctcggatgaccccacggatgggcactggtggaggccaaaccccaggt
cagactccgctacgtgacaaactcaacatcaatcccgaagaagcacttatggaatttgat
agtgtacacagtgccaaacaacaacagagggaattgaaggccagccttcggcgaggccta
tcttcactgccagctccaaggaatgattttgagattgtgataccagagaatgatgagaag
ctgttagaagagcctcaagataattcaaacttcatagaggatgcatcggatgtggagaat
agacgacttgcaaagctggcagaagagagagagaaggaattaaggagtagatctcagcct
cttcagagaggtcttccaaggcctgtggatatcaacacatctatactgagaccaaaggac
cttgagactcctattacagagctacagaaggctgaggagatgatcaaggttgagatgata
acgatgctgcattacgacgccttgaagaaccctgtaggggatcagccagggatgaagaaa
ggtgataaacctaccagtaagactaacccagctgcacatgcagcataccttgaacatcat
ccttatcaccagtatgaggaggaagatatgaaaaaagccaatgagttattaaaagctgag
atggaagtcgtgaaaaccggcatggcccacggtgatctccctaaagaggcctatacccag
gtgtgggaagaatgcctgggtcaggtgctttacattccatctaagaacaaatacaccaga
gccaacatggccagcaagaaagacaggattgaatcggcagagaagaaacttgagtctaat
cgtggtgtgatgacaagagaggcaaagagagcggctaagcttgagaagaaactaaagatc
ttgcttggaggctaccaatctcgagctcaaggactcaccaaacagctggctgagatccaa
gaggaggttgaacaagcctatgtagaactctgtacattccaagaactacagagcaatgaa
gatattgctattccaaagaggatggaatcccttcgagaggatgtaaagcgccagagtgac
cgagagagggagctccaacaacgttactctgatctcatgtttgaaagagagatgctcagc
gcacagattaccaagttagagatgcaacagtctggaccaaagttctaa

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