Lytechinus variegatus (green sea urchin): 121413490
Help
Entry
121413490 CDS
T11173
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121413490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121413490
03036 Chromosome and associated proteins [BR:
lvg03036
]
121413490
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121413490
Coactivators
SAGA/TFTC/STAGA complex
121413490
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121413490
STAGA complex
121413490
TFTC complex
121413490
SAGA complex
121413490
SLIK complex
121413490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
CSNKA2IP
Histone
RNA_pol_A_CTD
DUF1993
CENP-T_C
DUF5827
Motif
Other DBs
NCBI-GeneID:
121413490
NCBI-ProteinID:
XP_041462245
LinkDB
All DBs
Position
4:15718047..15734246
Genome browser
AA seq
274 aa
AA seq
DB search
MNPQTSTNQSVPPLVPITSGSAVQGSGGGGVPKAAVPCKTLQETIKAIETQINIMEKIGQ
LSSKQEGDLTKLRELHQKALQEQERLRVEKMHGNMAPIHQQPNSATQAIKSIASSSNNNS
NVQLGASSSSSSSSHSLQHSSSSIRDTPRESPISMSIGAGGDTGDSSKILNKKKIQDLVR
EVDPNTQLDEDVEEMLLQIADDFIENIVTAGCQLAKHRKSSTLEVKDILMHLERNWNMWI
PGYAPDEAPKAHKRPASTEAHKQRMALIRKTLKK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcagacatcaaccaaccagtcagtaccacccttggtaccaattacatcaggt
tcagctgttcaaggaagcggaggaggaggtgttcccaaagcagctgtaccttgtaaaaca
cttcaggaaaccatcaaggccattgaaactcagataaatattatggagaagattggtcag
ctttcatcaaagcaagaaggtgacttgactaagcttcgtgaactacatcagaaggctctg
caggaacaagagaggctccgagttgagaagatgcatggtaatatggccccaattcatcag
caacccaactcggctacacaggcaatcaagtcaatagcatccagcagcaacaacaacagc
aatgtccagcttggtgcgagtagtagcagtagtagcagctcccattcactgcagcattcg
tcatctagtatacgtgatacgcctagagaatcacccatctcaatgtccataggagccggt
ggggatacaggagattcatccaagattctgaacaagaagaagatccaagatcttgtgaga
gaggttgatccaaacacacagcttgatgaagatgttgaagagatgttgcttcaaatagct
gacgatttcatagagaatatagtgactgcaggctgtcagttggccaaacatagaaagtct
tcaacccttgaagtcaaagatatccttatgcatctagagaggaattggaacatgtggata
ccaggctacgcaccagacgaagcacccaaagctcacaagagacccgcatctacagaggcg
cataaacaaagaatggctcttatacgaaaaacactcaagaaataa
DBGET
integrated database retrieval system
