Lytechinus variegatus (green sea urchin): 121413514
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Entry
121413514 CDS
T11173
Name
(RefSeq) PAX3- and PAX7-binding protein 1-like isoform X1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121413514
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121413514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
121413514
NCBI-ProteinID:
XP_041462279
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All DBs
Position
4:complement(17198873..17217953)
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AA seq
917 aa
AA seq
DB search
MMKKKRNIRQRGRTSDSDEERAEPVSTKGDQIPFLETDYHTQIKQLEKEKSNKKKEKSEK
KKQGSSLLTFAYDEDDGEGGEVFKIKKSSHSRKQARKVRERQKQLRDEGERATGSPDIGA
QKNGGGVVSSVSIKQEKDDIPRPIKTEVKDEKKEVVLNGMDAEAAALAQEDLEEMGKKTQ
FTGFMPGVIPNANLIHAARKRRQMARERGDFIPVDDTQRFQSETSRLVRDDDNDQSGSDS
DEGRMGFTVKQQTSRQRVQEALNAGGLSPEVKSEEHEGHNEELERWEQEQIKKGTSVPQV
MIPQYQMYAQLMAQPSGPSADTSTPDPTSYYPQQQYAYYPAESTAYPAVDQSLMLGSAYS
TGMESPQEQPKAGVPDALSLPTKLPEINVEGVLKRLKQRLESIQEIHNAHLREQDSVSER
LQDAALSSTNLRDTQGDVSGQYNFFQEMRGYVRDLVECLDEKVPLINGLETAMLNLFKNR
ANQLLQRRQLDIKDQSAEFTGMSHKAAAGANMNRSEKKAAREDEEARQRRSAEREARRAR
RRRARKMENQFKEHNDGTSSDDEVTDSMLAKFKTEKERIVTEQSRVFEDVEDEFCSLPAI
IKRFQRWKFSQGDSYSDAYIGLCLPKLCEPFIRLELLCWNPLEANCKDIESYPWYDTLMF
YGFRNEDDYDREDDDIKLIPRIIEKVVLPKLSDLLENVWDPTSTLQTHRLIDIIHQLAQD
YPTVSADNKNTQLLLKSVVMRIRRTLDDDVYMPLFPADMLENKASGANSFMQRQFWSCLK
LLGNLLSWHGLVAKEQLLELAIDGLLNRYLLLSLNNSDIDETSIAKCDRIVSSLPVPWFE
ELEGDSTLRQLEPLCKYLKYAAGHIQSQAKADNTDKKNSRFLVKLIIKQLVNMRAMDHAL
KLTDDISLKDIKQIVTS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaagaaacgtaatattcggcagaggggtaggacaagtgacagtgatgaggaa
agagctgaaccagtgagcacaaaaggagatcaaattccgtttttggagacagattaccac
acacaaatcaaacaacttgaaaaagaaaagtccaacaaaaagaaggaaaagtccgagaag
aaaaagcaaggatccagtttgctgacatttgcttatgatgaagacgatggtgaaggtggt
gaagttttcaaaatcaagaaatccagccacagtcggaaacaagccaggaaagtaagagaa
aggcagaaacaattgagagacgaaggagagagggctacaggaagtcctgatataggagct
cagaaaaatggaggaggagtggtgagcagtgtaagcatcaaacaagagaaggatgacatc
cctagacccatcaagactgaggtgaaggatgagaagaaggaggtagtattgaatgggatg
gatgcagaagcagcagctttagctcaagaagacctggaggagatgggaaagaagactcag
tttactggttttatgccaggtgtcataccaaatgccaacttgatccacgcagcccggaaa
cggcgacagatggctcgtgagagaggggacttcattcctgtggatgacacccaacgcttc
cagtcggagacatcccgtctggtccgggatgatgataatgaccagagtggtagtgatagt
gatgaagggaggatggggttcactgtcaaacagcagaccagccgtcaaagagtacaggaa
gcgctgaatgcaggaggactgagcccagaggtgaagagcgaggagcacgaaggtcacaac
gaggagctggagagatgggaacaggagcagatcaaaaagggtaccagcgtacctcaggtg
atgataccacagtaccaaatgtatgcccaactaatggcccagccaagtggtcccagcgca
gacacatcgacccccgacccaaccagctactatccccagcagcagtatgcctactatcct
gcagagagcacagcgtaccctgcagtggaccagagcctgatgcttggatcggcctactcc
accgggatggagtcgcctcaagaacagcccaaggcaggggtccctgatgcattatctttg
cctaccaagctaccagagattaatgtagagggggtgttgaaacggctgaagcagagactt
gaatccatccaggagatccacaacgcccatttacgtgagcaggacagtgtctctgagagg
ctgcaggacgctgccctgagctccaccaacctgagggacacccagggggatgtatccgga
cagtacaacttcttccaagagatgagggggtatgtcagagaccttgtagaatgtctggat
gaaaaggttcctctcatcaacggtcttgagacggccatgttgaatctattcaagaaccga
gccaatcagctgcttcagagacgtcagctggacatcaaggaccagtcagcagagttcacc
gggatgtcccacaaggcagcggcaggggctaacatgaatcgcagtgagaaaaaagctgca
agggaagacgaggaggcgaggcagagaaggagcgccgagagggaagcaaggagagcaaga
agaagaagagctaggaagatggagaaccaattcaaagaacacaacgatggtacctctagt
gatgatgaagtcactgacagcatgctggctaaattcaagacagaaaaggaacgcatcgta
acggagcagagcagagtctttgaggatgtggaggatgaattctgttcgttaccagcgatc
atcaagcgatttcaacgctggaagttttcccagggtgattcctactctgatgcctacatt
ggtctgtgtttacccaagctatgtgagcccttcatccgtcttgaacttctgtgctggaac
cctcttgaggccaactgtaaggacatagagtcttacccatggtatgacacattaatgttc
tatggcttcaggaatgaagacgactacgacagagaggacgatgatatcaagctcatccct
cgtatcatcgagaaggttgtattaccaaaactctcagatcttttagaaaatgtctgggat
cctacgtcaacgttacaaacccatcgtttaatagacatcatacatcagctagctcaggat
taccctacggtctccgcagataacaagaacacacagctccttctcaaatcagtcgtaatg
agaataagaagaaccctagacgatgatgtctacatgcctctcttccctgctgatatgtta
gaaaacaaagcttccggtgctaattcctttatgcagagacagttctggtcatgtttgaag
ttgctaggtaacctgttgtcatggcatggccttgtcgccaaggagcagcttttagaactt
gctatagacggtctactgaatagatacctccttctctcactcaataactctgatatagac
gaaacaagcatcgccaaatgtgataggattgtatccagtctcccagtgccatggtttgag
gagcttgaaggagacagcactctaaggcaactagaaccactgtgtaaatatctcaagtat
gctgctggacacatacaaagtcaggcaaaggcagataatactgataaaaagaatagcaga
ttcttggtgaagctgatcatcaaacagcttgtcaacatgagagctatggaccacgccctc
aaactcaccgatgacatcagtctgaaagatatcaaacagatagtgaccagctga
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