Lytechinus variegatus (green sea urchin): 121413749
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Entry
121413749 CDS
T11173
Name
(RefSeq) dehydrodolichyl diphosphate synthase complex subunit DHDDS-like
KO
K11778
ditrans,polycis-polyprenyl diphosphate synthase [EC:
2.5.1.87
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
121413749
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lvg01006
]
121413749
Enzymes [BR:
lvg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
121413749
Prenyltransferases [BR:
lvg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
121413749
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-GeneID:
121413749
NCBI-ProteinID:
XP_041462612
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All DBs
Position
4:27613325..27635064
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AA seq
369 aa
AA seq
DB search
MDPEFRKSNEHWIEASAATSEWFPEKQYQAQKTWFQSFCLRVLKCGPVPQHVAFIMDGNR
RFAKKKSFQTLEGHSLGFEKLAETLQWCLDLGITEVTVYAFSIENFKRSRQEVDGLMELA
RKKFLRLLEEKDQIMKHGVCVRVIGDLDLLPRDVQEVVAEAMFISRDNTRATLNVCLAYT
SRQEMANAVKEVALGVEEGILFPSDVSEELIEQCLYTNRCKDPELLVRTSGEVRLSDFLL
WQSGYSVLSFVEVLWPEFSIWHLFAAVLHYQTKYNAVQNAKEAMLHNRRRAVQESDHRCV
LDQLNNSNQTTISDHIETPSNEDSFHKRLSEYTRDRESRIAKFLGSLHARRENFLISLLP
ERTRCQLVS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaatttagaaagtctaatgaacattggatcgaggcatcagcagctacgtcg
gaatggttcccagagaagcagtaccaggcccagaagacatggttccagtccttctgtctg
cgggtcctcaaatgtggtcctgtgcctcagcacgtagccttcatcatggatggcaatcgc
agatttgctaagaaaaagtcttttcagaccctagaggggcattcacttggttttgagaaa
ttagcggagactctacaatggtgtttagatctaggtattacagaagtcactgtttatgca
tttagtatagaaaacttcaagagatcaaggcaagaagtcgacggactgatggaattggca
agaaagaaatttctcagattattagaagaaaaagatcaaatcatgaagcatggtgtctgt
gtgcgagttataggagacctcgacctcctacccagggatgtgcaagaagtcgttgcagaa
gccatgtttatatcacgtgataacacaagggctactctaaatgtatgtctagcgtatacc
tccaggcaagagatggccaatgcagtcaaggaggtggctctaggagtagaagaaggcatc
ctcttcccaagtgatgtttcagaggaattaatagagcaatgtctgtatactaatagatgt
aaagatcctgaactactggtgagaacatcgggggaagtcaggttaagtgacttcttattg
tggcagagcggctattcagtactgtctttcgttgaggtgttgtggccagagttttccata
tggcacttgtttgcagcagttcttcactaccagaccaaatataatgcagtacagaatgca
aaggaagccatgttacacaacaggaggagagccgtccaggaatcggaccacagatgcgtt
ctggatcagttaaacaacagtaatcaaacaacgatctcggatcatatagaaacgcctagt
aatgaggattcattccataaaagactttcagagtacactcgcgatcgtgagtcaaggata
gcaaagtttctaggatcacttcacgcaaggagagaaaactttttaattagtttattacct
gaaaggactcgatgccaactcgtatcctaa
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