Lytechinus variegatus (green sea urchin): 121413796
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Entry
121413796 CDS
T11173
Name
(RefSeq) protein artichoke-like
KO
K05401
toll-like receptor 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121413796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121413796
04090 CD molecules [BR:
lvg04090
]
121413796
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121413796
CD molecules [BR:
lvg04090
]
Proteins
121413796
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
TIR_2
TIR
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
121413796
NCBI-ProteinID:
XP_041462684
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Position
4:29447945..29450332
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AA seq
766 aa
AA seq
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MYVQNNKIKTLNFDDCSEWSHLSNIYVSNNEIVEIHQRDFLPLQSLPLSYLFINGNKINM
FPREAFYHLNLLRLIKLDSNTIESFDIQPFLGMDFIARLSVKDGKISKLLPPQNTTNKED
HLYPTIISLDIANNLIESVPPNSFWGFPKLQILNLTRNKISILVNKSFCQMQSLFELNLS
SNKIMFLPNNTFACLSCLKILNLMNNLLQSIYPESFNGLPRIQSVLLSHNSIKYLNRGRQ
AWTLRTLQSIDFSFNDITSIGKDSFTGLINLKDLILSYNQIYYFYQTAFSELFKLSRLHL
TNERKIFLEKTFKQLHSLTFLDLSNSPIKISRYQTEQFRNLTRLQELRMEMAQLSNTDLY
NSQRNESLFTGLCSLQKLNLKDNSLMNLDRRVFQALSNLRYLDMTNSRIKVLKSGIFSPL
SSLRGLYLGSNELQKIPGDIFYGLHDLTVVKIQNNRIFDLDPRTFAQNPRLDILYLSGNQ
ITNIKPGTVLPSNSPFNLDLSRNPITCSCSLAWFRKWLELSNVNFKNANQAICSGTSLKG
LASKPILSFHPDDHCGINIVLILVLSFSGVLVGIMIIIAYTKRWWLNHKFFLLKLAIVGY
KEMTEEFNDVNYRHHLNIMFQESEQEWIDRVMKPGLEARMPHLQNIIFGDEDLHIGMYYI
NAIFDALDNSFKTVLLLSNESINDAWTMTKVRMALEYINDTGLDKIILIFVEDIEDENMP
YLVRLFLSRNKPYMLWTDDEDGQELFWAQFEKSMRANKAINNAIPL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtacaaaataataaaattaaaacactcaactttgatgactgttcagaatggtct
cacttgtctaacatttatgtttccaataatgaaattgttgaaattcaccagagggacttt
ctaccactgcaaagcctacctctatcttatttattcataaatggaaataagataaacatg
ttcccaagagaagccttttatcatctgaacttgttgcgattgataaaacttgattcaaat
accatcgaatcatttgatattcagcctttcctaggtatggattttattgcaagattatca
gtgaaagacgggaaaatcagtaagcttcttccacctcaaaatacaacaaacaaagaagat
catctgtatccaaccatcatcagtcttgacattgccaacaacttgatagaaagtgttcct
ccaaattcattttgggggtttccaaagcttcagattcttaacttgactagaaacaaaatc
tcgattcttgtgaacaagtcattttgtcagatgcaatcattattcgaacttaatctatca
tccaacaaaattatgtttttgccaaacaacacttttgcctgtctgtcctgtttgaaaata
ttaaatcttatgaacaacttgttacagagcatttatcccgaatctttcaatggcttgcca
aggattcagtcagtgctcctgtcacataactctataaaatatcttaacagaggaaggcaa
gcatggacacttagaactcttcagtcaattgatttttcctttaatgacatcacctccatt
ggtaaagattcattcaccggccttataaatctaaaagatcttatcttatcttacaatcag
atctattatttttaccaaactgcattttctgagctattcaagttatcaagactccacctc
acaaatgaaaggaaaattttccttgaaaagactttcaagcaactgcattctttgactttc
ttagatctgtcaaattctccaatcaaaatatcacgttatcagactgagcaattcagaaat
ttgactagactgcaagaactgcgaatggagatggcacagttaagtaatactgacttatac
aatagtcaaagaaatgagtcattattcactgggttatgctccttacagaaactaaatcta
aaagataattctctgatgaacctagacagaagagtttttcaagccctgtctaacctccgc
tatcttgacatgacaaattccagaataaaagtactgaagtcagggatattcagtcctctc
tcatcccttcggggtttgtaccttggaagtaatgagctgcaaaagattcctggtgacata
ttctatggtctccatgatctaactgtggttaagatccaaaacaacagaatttttgacctg
gacccaagaacttttgcccagaaccctcgactggacattctctatctatctggaaatcaa
atcaccaacatcaaaccaggaacagtactcccgagcaattccccttttaatttggatcta
tctagaaacccaatcacatgctcttgctctttggcatggttcagaaaatggctcgagttg
agcaatgtcaattttaaaaatgccaaccaagcaatctgctctgggacatcattaaaggga
cttgctagcaagccaatcttgtcatttcatccagacgatcactgcggtatcaacattgtt
cttatcctggtcctctctttctctggtgttctggttggtattatgattattattgcctac
actaaacgatggtggttaaaccataaattcttccttctcaagctggccatcgtgggttac
aaagaaatgacagaagaatttaacgatgtcaactaccgtcatcatctcaacatcatgttc
caggaatccgagcaggaatggatagatcgtgtcatgaaacccggcctggaggcgaggatg
ccacatctgcagaacataatctttggagatgaagaccttcatataggtatgtactatatt
aatgcaatctttgatgctcttgacaacagcttcaagacagtgttgctgctaagcaacgag
tctatcaacgatgcctggaccatgacaaaggttcgcatggctctagaatacatcaacgat
acaggacttgacaagatcatcctgatctttgtagaggacatcgaggatgagaatatgcca
taccttgtcaggttgttcttgagtaggaacaaaccttacatgctgtggacggatgatgaa
gatggtcaggagctgttctgggctcagtttgagaagagcatgagggcaaataaagctatc
aataatgccatccctctctga
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