Lytechinus variegatus (green sea urchin): 121413800
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Entry
121413800 CDS
T11173
Name
(RefSeq) LOW QUALITY PROTEIN: inositol polyphosphate 5-phosphatase OCRL-like
KO
K01099
inositol polyphosphate 5-phosphatase INPP5B/F [EC:
3.1.3.36
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00562
Inositol phosphate metabolism
lvg01100
Metabolic pathways
lvg04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121413800
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
121413800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121413800
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
121413800
Membrane trafficking [BR:
lvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121413800
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
121413800
Rab GTPases and associated proteins
Rab associated proteins
121413800
Protein recycling
Other Rab GTPase associated proteins
121413800
Endosome - Golgi transport
Rab associated proteins
121413800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
OCRL-like_ASH
RhoGAP
INPP5B_PH
Exo_endo_phos
DUF4692
T3SS_SCTL
Motif
Other DBs
NCBI-GeneID:
121413800
NCBI-ProteinID:
XP_041462691
LinkDB
All DBs
Position
4:complement(29672016..29708158)
Genome browser
AA seq
1085 aa
AA seq
DB search
MDLRIAVQEKLNTAAGEQCIDYLEGTLVPDWLQGKRLLALVHCPTAARGVGEQGLLIFTR
PDIIKQSSDLILVRALPIKGDFSYTIAWPSSETLARDQAMVRAHIKTAEVNLVIEVPFAQ
RSSNFFNNVKKSMTACLEKVKQGIVPQFFWMQRYQLQIKGASAQQQPTSDLLNLSSTTTP
TDPFGMSSFAPLSPQAAPVAPSTTTTNPTASTNPFMPHAKTMPLLDAGGVNQPPPPSMNR
VTSDPVLHGYVNLQAQSELASEQNLLDSTVGTAPASNMVHPKAPAMSSTSEAWRISQDFG
NNADGSSSSSTSSSSSSSSSSSTSSVDKVGLPGSGFEDHFGSLILDSNGRLHAQDDHFEE
EKKGSTFYTNLDGHTLEAPKTSLMGSQPDIDTLGYASVKPFKPAGIREEILKRREAEYTF
PHDFRVFVGTWNVNGKGATEDLRHWLAADPKPPDMYAIGFQELDLSKEAFLFNDSIREEE
WHKRVVMCLHQDGIYIKLKLIRLVGMMLLVFIQERHYPYIDEVIAETVGTGIMGKMVRQX
GAVAVRFNFHNTSFCFINSHLAAHMEEYERRNQDYHDICARMKFERENHQPLGVMQHDVV
IWMGDLNYRINELNVDTVKALIDNNRFKELLVQDQLNRQRELSRVFNGFEEATIGFRPTY
KYNSGSDEWDSSEKQRVPAWCDRILHRGDRIVQKVYRSHMKLRLSDHKPVSALYDIGVKV
VDEKRFREVVEEEIRKLDRQENEALPQVTLGRNELKLGELRFMEEVVETVEVANTGQVNT
MVEFVAKLDDKSPCKPWLKVEPQSTFMLPGDMIEVKLRAFIDKNTAAAFNAGKDTVEDIL
ILHLENGKDYYITVTGSYRPSSFGASLEGLVRMHEPIHEMTPKQVVDLETNPTSTQKTSS
ADFQSYDIPKEIWMLVDYLFRNGIHKENLFGQEGLHSEVLAIRDFLDTGFPEEIPGSIHS
VAESLLVFLASLREPVIPYKFYQKCLDGANNFTLCKQIMKQLPRCHRNVFKYLTALIREL
LMHSDDNRLDAKTLATIFGELFLRCPPEDKEKEDASVRNRTTNRQQITRKKATFVYQFII
HEYDD
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaggatagcagtgcaggagaaattgaacactgcagccggagagcagtgcatt
gactatttggaagggacacttgttcctgattggttacagggcaagcgattgctagccctc
gtccattgcccaacggcagcaagaggagttggcgaacaaggacttctgattttcaccaga
cccgacatcattaagcagagcagtgatctcatactcgtccgtgcactccccatcaaggga
gatttcagctacacaatagcatggccctcctcagaaacccttgcaagagaccaagcaatg
gtgagggcgcacatcaagactgcagaggtcaatctggtcattgaggtccccttcgctcaa
cgatcttcaaatttctttaacaatgtgaagaaatcaatgacagcttgtcttgaaaaggtg
aagcagggtattgtccctcagttcttctggatgcagcgctaccagctccagatcaaagga
gccagcgcccagcaacaaccaacctctgatctcctcaacctctcctccacgaccacgccc
acagacccctttgggatgtcctccttcgcccccctctccccccaagctgccccagtggca
ccctcaaccaccactaccaaccctactgccagtactaacccattcatgccccatgctaaa
accatgcccctcctcgatgcagggggcgtcaaccaaccccctcctccgtccatgaatcgt
gtgacctccgaccccgtgctgcacggctacgtcaaccttcaagcgcagagtgagctggcg
tcggagcagaatctattagacagtactgttggcacggcccctgcaagtaacatggtacat
cccaaggccccagcgatgtcttcaacatcggaagcatggaggatatcacaagactttggt
aataatgctgatggttcatcttcttcttcaacctcctcatcgtcatcctcatcatcgtca
tcatcgacatcgagtgtagacaaagtaggtttgcctgggtctgggtttgaggatcatttt
gggagtctgattttagacagcaatggtcggttgcatgcacaggacgatcactttgaagag
gaaaagaaagggagtaccttctataccaacttagatggacacaccttagaggcacccaag
acatccctaatgggttctcaacctgatatagatacgctgggttacgcgtctgtcaagcct
ttcaaaccggcaggcataagagaagagatcttgaaaagacgggaagcagagtacacattt
cctcatgatttcagggtctttgttgggacatggaacgtgaatggcaagggggcgacagag
gacttgaggcactggttagcagccgaccccaagcctcctgacatgtatgccataggtttc
caggagttagatcttagcaaggaagctttcctcttcaacgattccatcagggaggaggag
tggcataaaagggttgtcatgtgccttcatcaagatggcatctatataaagctgaagttg
atccgtttagttggtatgatgttactagtattcattcaagagagacactatccctacatt
gatgaggtcatagctgaaacggtcggtacaggcatcatggggaaaatggtaaggcaataa
ggggctgtggcagtgcgtttcaacttccacaacacctccttctgcttcatcaactctcat
ctggcagcccacatggaggaatacgagaggcgtaaccaagactaccatgatatctgcgcc
aggatgaagtttgaaagggagaaccatcagccccttggtgttatgcagcatgatgttgtg
atatggatgggtgatctgaattacaggatcaatgaacttaatgttgatacagtcaaagca
ctgatagacaacaaccgcttcaaagagctactcgtgcaggatcagctgaatagacagagg
gaactgtctcgtgttttcaatggctttgaggaagctactataggattccgtccaacctac
aagtacaactctggcagtgatgaatgggattcaagtgagaagcagcgtgtgcctgcgtgg
tgtgatcggatcctgcaccgcggtgatcgcatcgtccagaaggtttacaggagtcacatg
aaactgagactgagtgatcacaaaccagtcagtgctctctatgacatcggggtgaaggtg
gtggatgagaagaggttccgtgaggttgttgaggaagaaattagaaaactggacagacaa
gagaacgaggcattaccacaagttactctgggcagaaatgaattgaagctaggtgagctc
cgcttcatggaggaagtagttgagacggttgaagtggcaaacaccggtcaggtcaatact
atggtggagtttgtagccaagctggacgataaatcaccttgtaaaccatggctcaaggta
gaaccacaatcaacattcatgttgccaggtgacatgatagaggtgaagctgagagcattc
atcgataagaacactgcagcagcattcaatgcaggcaaagacactgtagaggatattctc
attctacatctggagaatggcaaagactactatatcacagtaacaggtagctacagacca
agtagctttggagcttcattagaaggtctagtgaggatgcacgaacctatacatgagatg
acgccaaagcaggtggtggatctggaaaccaatccaacttctacgcagaagacatcaagt
gcagatttccagagttatgacattcctaaagaaatttggatgctggttgattatttattc
aggaatggaattcacaaggagaacttgtttggtcaagaaggtcttcattctgaagtacta
gccatcagagacttccttgatacaggctttccagaagagatccctggcagtatccattca
gtagcagaatctcttctagtgttcctggctagtctcagggaaccagtcattccatacaaa
ttctatcagaaatgccttgatggtgccaacaactttaccttgtgcaagcagatcatgaaa
caactaccaaggtgtcacaggaatgtcttcaaatacctgacagcgttaatacgtgagcta
ctcatgcacagcgatgacaacagacttgatgccaaaacattagcaaccatatttggggag
ctcttcctgcgctgtccaccagaagacaaagagaaggaagatgcgtccgttaggaacagg
accacaaacagacaacagatcactcgaaagaaagcaaccttcgtctaccagttcatcatc
catgaatatgatgattga
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integrated database retrieval system
