Lytechinus variegatus (green sea urchin): 121413892
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Entry
121413892 CDS
T11173
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121413892
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvg01007
]
121413892
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121413892
Enzymes [BR:
lvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
121413892
Amino acid related enzymes [BR:
lvg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
121413892
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121413892
Prokaryotic type
121413892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2b
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
121413892
NCBI-ProteinID:
XP_041462823
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Position
1:39943855..39979299
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AA seq
516 aa
AA seq
DB search
MDTDVFLRRQYVMYRSIVNIGCLIRELKLSKPLHYKQRIKEEVNKLLDLKAQLGDGPTQK
YVLKTAKGTRDYTPRQMAIREGVFKVIIDTFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYVAMNKIAKIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDAMIPDAECVKIVHEILTNLKLGDFVIKVNHRQILDGMFEACGVPEDKFRM
ACSAVDKLDKTFWEDVRAEMIDEKGIDPVAADRIGVFVQQNGGQELVDKLLNESALKDNK
SAKQGLEAMRLLLKYCEIFGVLDKVSFDMSLARGLDYYTGVIYEAVLKGAECLPTKTGEQ
VGVGSVAGGGRYDNLVGMFDAKNKKVPCVGVSIGIERVFSIMEAKAQLSEDVVRTIETQV
LVASAQPNMLEERMKLCNELWSADIKAEMSYKKNPKMLDQYQQAEKYSVPLLAVIGEQEL
KDGVVTLRNSATRVEEQIPRSDLIRVIKERCDVENW
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacgtcttcctgaggaggcagtatgttatgtatcgtagtatagtgaatata
ggctgtctgatcagagagctcaagctttctaaacctcttcattacaaacagaggatcaaa
gaagaggttaataaactgttagatttgaaggcgcagctaggagatggacctactcagaaa
tatgtcctcaaaactgcaaagggtaccagggattacacacccaggcagatggcaatcaga
gagggtgttttcaaggtgatcatagataccttcaaacgccatggagccgagaccatcgac
acaccggtctttgagctgaaggaaaccctgacagggaagtacggggaagactccaagctc
atctacgatctgaaagaccaaggaggggaactcctctcactcagatatgatctcactgtt
ccgtttgctcgctatgtggcaatgaataagattgccaagatcaagagatatcacatagca
aaggtttataggagagataaccctgcaatgaccagaggaagatatagagaattctaccaa
tgtgattttgacatcgctggtcagtacgatgccatgatacctgatgccgagtgtgtaaag
atcgtccatgagatccttacaaacctcaaattaggagacttcgttatcaaggtaaatcac
aggcagatattggatggaatgtttgaagcatgcggtgtaccagaagataagtttaggatg
gcatgttcagcagttgacaagctcgacaagactttctgggaagatgtgcgagctgaaatg
atagatgagaaaggaattgatccggtggcagctgacaggatcggtgtctttgtccaacaa
aatggtggtcaagaactggttgataaactattgaatgaatcagctctcaaggataacaag
tctgctaaacaaggtctggaagctatgagactactactcaagtactgcgagatctttggc
gtgcttgacaaggtatccttcgacatgagcttagcgagaggattggattattacacaggt
gtgatatatgaagccgtgctcaagggggcggagtgcttaccgaccaagacgggggaacag
gtgggcgtcggttccgtcgccggtggtggtcgctatgacaaccttgtgggcatgtttgat
gccaagaacaaaaaggtaccttgtgttggcgttagtatcggtatcgagagagtgttctcc
ataatggaagccaaggctcaactctcggaggacgttgtgaggacgattgagacacaggtc
ctggtcgcttcagctcaacccaacatgcttgaagagagaatgaaactatgtaatgaacta
tggtcagctgatatcaaggctgagatgtcatacaagaaaaaccctaagatgttagatcag
tatcaacaggctgagaagtacagtgttcctctactagccgtcataggtgaacaagagctc
aaggatggtgtcgtcactcttagaaattctgcaacaagggtggaggaacaaataccacga
tctgatcttatacgagtcataaaagagagatgcgatgtggagaactggtag
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