Lytechinus variegatus (green sea urchin): 121414038
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Entry
121414038 CDS
T11173
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121414038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121414038
Transporters [BR:
lvg02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
121414038
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
121414038
NCBI-ProteinID:
XP_041463012
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Position
4:40008613..40026346
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AA seq
535 aa
AA seq
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MAVHWGGVAGMIVFYLIILLVGMWASKRTKGGDNPERVMVARRDIGWFVGFFTLVATWVG
GGYINGTAEKVFRPGGGLLWTQAPIGYSLSFAVNGLFFTRKMRASNYVTMIDPFQIKYGS
RFGGLLFVVALLGELLWCATILAALGSSIAVILELDQNLAVIISACIAAVYTLFGGLYSV
AYTDIVQLILIFIGLWLAVPFAMTHEAVVPISETKDEWLGEWDNKLVGVWLDNWMLLIFG
GVPWQAYYQRALAAKTPDLAVKLSYAATIGCLVMAIPAVIFGAVGSSTDWEMTNVNLNKT
DPYEDASLVLPLIMQFLTPPFIAFMGLGAISAATMSSTDSSVLSSSSMFVRNIYSTIFRP
KASDKEIIWVLRCTILVVTAIATILALTLKSIYTLFVLCSDLVYVILFPQLICVVHVPKA
NTYGLIPGLIIGLILRLGGGEEAIGMPHFIRYPFYDDDYGQLFPFRSLAMLVSLITTLVF
SYGVALLFEKGYVSEKWDIFECFHVDDENEKNENHPAVKYELQGPENKNESDKFL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcactggggtggtgtcgccgggatgatcgttttctatctcatcatccttctc
gttggcatgtgggcttctaagagaaccaaaggaggggacaatcctgaacgcgtgatggtg
gcccgtcgggatattggatggtttgtcgggttcttcacactagtcgcaacttgggtggga
ggtggctacatcaatggaacagcggaaaaggtattcagaccaggcggtgggttattatgg
acacaagctccaatcggatacagtctcagtttcgccgtcaatgggcttttctttacgagg
aagatgagagcatccaactacgtgacaatgatcgacccgtttcagatcaaatatggatct
cgtttcggaggattattgttcgtagtagcgctccttggggaactcttatggtgtgccacc
atattggctgcactcggctcatcaattgctgttattttggagctcgaccagaatttagct
gtgatcatatctgcctgtatcgccgctgtttatactttgtttggaggcctctattccgta
gcttacactgacatcgtgcaacttattctgattttcatcggactttggttagcagtgcct
tttgcaatgacccatgaagccgtggttcccatatcggaaacaaaagatgagtggcttgga
gaatgggataacaaattagttggggtgtggctagataattggatgcttctgatatttggc
ggggtaccgtggcaggcctactaccagcgagcccttgccgccaagacgccagaccttgcc
gtaaagttgtcgtacgcggcaaccatagggtgcttggttatggctatcccagctgtcatc
tttggtgccgttggttctagtactgattgggagatgacgaatgttaacttaaacaagaca
gatccctatgaggatgcaagcttggtccttcctcttatcatgcagtttcttacccctcct
tttatcgctttcatgggactgggagccatttctgcagcgaccatgtcgtcgaccgactca
tctgttctctcatccagttctatgttcgtaaggaacatctattcgaccatcttccgacca
aaggcttcagacaaagaaattatttgggtgttgcgatgcactatccttgtcgtcaccgcg
atcgccacaatcctagccctgacgctcaagtctatttacaccctcttcgttctctgttcc
gacctcgtgtacgtcatcctcttccctcagctgatctgcgtcgtccatgtgcccaaggcg
aatacgtatggtctcattcccggcctcatcatcgggctcattctccgcctcggtggtggt
gaggaagcaataggcatgccacattttatccgttacccgttttacgacgacgattacggt
cagctctttccatttcgatcgctggccatgctggtatcgctgatcacgacccttgtgttt
tcttacggtgttgccctcctgttcgagaagggctacgtgagtgagaaatgggatatcttc
gagtgctttcacgtcgacgacgaaaatgaaaagaatgaaaaccatcctgcagttaaatac
gaactgcagggcccggaaaacaaaaatgaaagtgacaagtttctatag
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