Lytechinus variegatus (green sea urchin): 121414046
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Entry
121414046 CDS
T11173
Name
(RefSeq) afadin-like isoform X1
KO
K05702
afadin
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121414046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
PDZ_6
FHA
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121414046
NCBI-ProteinID:
XP_041463025
LinkDB
All DBs
Position
4:complement(40392084..40468371)
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AA seq
2255 aa
AA seq
DB search
MDPRSREEDRMRLKQAIQDWNATRMDLFEISDPDMNLEFHGVMRFFFQDATDGSSNSKCI
RVSSTASTRDVVNTLIEKFHPDMRMLSIPDYALFELQRDQDDRQLQDEERPLYVQLNWTK
DLKEGRFLLRQVNDPTKLEFYAKDGKVQNFDKNTPKRLSKREKKELKKERKAAQLRGEVK
AYDKVSSSNFTRTISNPENVLKRKRQQKQDQLEKFKHRPESGGAFKVYAHTTFPEVPYKT
LLISINTNASEIVRESLDKFGAMKANPADYCLAKVVVPPGCSIDDYGKENFQEAILDEDE
YPMDAVLRWPESRGELHFELKRKPSDHVPRLKRPGKNKMEESFQDPNSIPLERLPYFLEL
NNDGTDIIDYKPKHYRLQSDVTEVGSQRDPPGSGPYLQFVAPDILPRHCVVAKMEGVVTL
TPSCAEAEIYVVGERIYETTILQHGAVVQFGRQYTFRFCDPQVEDPDWEDRNKSHVETTF
DADGSIETYGGKQEKIINRTPAQSYETTFDASGQVATHTGRHPQVPDPNTEVLPLSLEFR
DTGEDTFFDVVVRQVNGAQIYFKLAPTYALYLACRYRLSKLYRPEMGPTERAQRLSAFLN
KMADIIDRTVEEESQVAGALTFWLANVSELLHFFMADRDIGGISQDAQDILHTCVQNTFR
HLVRAMQLELNKNLSAFLDPSDEADVEKDLIADEDAKSVENGRWMRPPSRSPMSGRPTIG
DVLQILSSAMTLLRVCRVNAALTIQLFSQLFHFISASLFNRLVSSPRHAGLCTQDWGDRL
MRRLSRVVAWAEKQGLEVAADTHLQKLKQALDLLIAPKENSNQLNSAINNSWMLNSRQMK
AILDNYVPPKGAIQIPPEAIAKATAMAASQDELQAQREGHPILIEEERELRVPAFLPDDG
YSSDIIKGIPNGLREFFNPLIQAALVRLTPHPKANGTWTVYMYGNQPSILDSPGPPSPQS
PTSPQPGSAPHLEPQVKPDAKPAGKEPEVVTIELNKHGKPGMGLSIIAATGAGQEKIGIY
VKAVVPGSAADKDGRVKAGDQILAVDGNSLLGLDQDAAAQFLVKSGQIVEMTIAKQGAIF
HGLAQILSQATPPQQRAYKGEPRQPRPVSEDLSGRSGTLPPGMGAPRESVDPRDIATMPR
GMIGVPLVGLREADKAKSSPNLAEDRPPERGNYMPMTSNNGRDDYSRHGSVGMRPEPRSR
MEATPTPPISQRSKSVSHLDPEPMEHESQRPVKSTVDLSQKRDEQPYRGHAPREEPPFRR
EEDPHMRPGMPDKSLESFEEEPYRRQPGSRPGDPRRESPDPRGPIPQQRPGQMRPNPQPR
QVQQQMQHLQQRQRGPSPQHPGQYPPGQMGPRGPQQRMPMPQSRFPPGQQPGMGPRGPPP
QQRMPDGAMQQQQPPNRYGPPPGVFRIGPQGEIQRPAPPQDSRDNYGMPPRQRNYSQGDM
IDDPPEPRARVYSEGNTLRGPDHPNGPQPAPRTIREDQSRQYAPSGPQSDDLPPPPPLDH
SASQMQDNNDLPPPPPQNMDEEEEYRRWQEERANRMGGDPSRQSPNSGFASLPRQGRINR
SSSLTRDTLPVGSESQPTPPQQKPPLGPKPVPPPMPPERTNASAEAARGSLERRPPNSAP
GMNPTGSASLSSKSSPWDREEKERQEKRLEEQVRLMRDDEIEYLSSLPSLTPVQQERLNK
MKLDQQFQQRLEESMMDNEDDDEEDDLTKKPEFQNQMAMANRSAEIAAQKAREQQLERER
QEERENDMRRKQEMRVQELQMQRQQERQREIEMQRQQELQRQQEFQRKQEMQRQQEVQRQ
QELREQELRQQEMQRQKEAQRQQELQRQQEMQRQQELQRQEEMRRKEDMRRQEEMRRQEE
IRRQEEMRRQEEMRRQAEMRRQEEMQRQQEEQRQQQLQRQEEERQRQLEADRRAQQQHEE
TNAQLELKKLQEERAKWIKEQEELRRQAEEERRKYEEMKRLREQEEEMQRRHQQQRMEFE
KRAAELEEERRRLEEMSFDDPPRQMNDMNASVSRPGQTGMVHATVSAGYVPGPNKPYVQA
APPERPPTDGYSTTDANFLNKPKPFKKVPPPVAPKRVTFRPGQRPSTSVDPLNNLGSAGD
RGSISSQQSISSNNSGGTPAPPPQQSSFGNGYTNNFHTAPMNDYMHNHNPAPPPPPPASV
NNTLGYSTPPQNGPPPVYRTGDTPGVIGAQEVYNDPRDKRLAKQQLQPKNVSPDMKNMSF
RDKMKLFSESTPNEKPKTSKWEREFLAMNPSLHTP
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atggacccccgaagcagggaagaggatagaatgaggttaaagcaggcgattcaggattgg
aatgctactcgaatggacctgttcgaaatttcagatcctgatatgaatctggaatttcat
ggagtgatgcggttctttttccaagacgcaactgatggatcatcaaactccaagtgcatc
agagtgtctagcacggccagcactcgagatgttgtcaacaccctcattgagaagtttcac
cctgacatgcgtatgctgtctattccagattatgcactgtttgaactgcagagggaccag
gatgatcgtcagctgcaggatgaggaaaggccattatatgtgcagctcaactggaccaaa
gatctgaaggagggacgatttctactcagacaggtcaatgacccgacaaagcttgaattc
tacgctaaagatggtaaagttcagaactttgataagaacacacccaagcgtctatcaaag
agagagaagaaggaactgaagaaagagaggaaagcagcccaactcaggggtgaggtgaaa
gcttacgataaagtcagttcttcaaacttcaccaggactatctcaaacccagagaatgtg
ctcaagagaaaacgtcaacagaagcaagatcagctggagaagttcaaacacagaccagaa
tcaggtggagcctttaaggtttatgcccataccacatttccagaagtaccatacaagact
ctgcttatttccataaacaccaatgcttcagagattgtcagggagagtctggataagttt
ggagcaatgaaagccaaccccgcagactactgcctagcaaaggttgtagtaccaccgggt
tgtagcattgatgattatgggaaagagaacttccaagaagccatcttggatgaagatgaa
taccctatggatgctgtcctgagatggcctgagagcagaggtgaacttcactttgaattg
aagaggaagccatcagatcacgttcctcgtctcaagagacctggcaagaacaagatggaa
gagagttttcaggatcccaacagcatccctctggagagattgccatacttcctagaactc
aataatgatggtacagatatcattgactataaacccaaacactacagactccagagtgat
gtcacagaggttggcagtcagcgtgaccctcctggctctggaccttatttacagtttgta
gcaccggacatccttccacggcactgcgtggtagccaagatggaaggggtggtcactttg
acgccctcgtgtgccgaggcagagatctatgtggtcggtgaacggatctacgagaccacc
atcctccagcatggggccgtggtgcagtttggacggcagtacactttcagattctgtgat
ccacaagtggaagacccggactgggaggataggaacaaatcccacgttgagacgacgttt
gatgctgacggtagcatcgagacttacggaggcaagcaggaaaagatcatcaaccgtacc
cctgcacagagttatgagaccacattcgatgcctccggccaagtagccacccatacaggg
cggcatccgcaggttcctgatccaaacactgaagttctgccacttagcttagagtttaga
gacacaggtgaggacaccttctttgatgtggtagtccgacaggtgaacggagcccagatc
tacttcaagcttgccccgacatacgccctttacctggcatgccgctatcgtctctctaag
ctctaccgccctgagatgggtccgacagagagggctcagaggctttccgccttcctcaac
aaaatggccgacatcatcgacaggacagttgaagaggaatcccaagtagccggtgccttg
accttctggttagccaatgtctctgagctccttcacttcttcatggctgatcgggacatt
ggtggtatctcacaggatgcccaggatatccttcatacgtgtgtgcagaataccttcagg
catcttgtgagagccatgcaactagaactcaacaagaacctctccgcattccttgaccca
agcgatgaagctgatgttgaaaaagatctcatcgctgacgaggatgcaaagagtgttgag
aacggtcgatggatgagacccccttcacgaagccctatgagtggccgcccaacaataggt
gatgtcctccagatcctgtcctcagccatgaccctcctgcgggtttgccgggtcaacgcc
gccctcaccatccagctcttctcgcagctcttccacttcatcagcgccagtctcttcaac
cgtctggtctcctccccccgtcacgccggtctctgcacccaggactggggtgacaggttg
atgagacgtctctctagggtggttgcctgggccgagaagcaggggcttgaggtcgcagcc
gacacccaccttcagaaactcaaacaggccctggacctgttgatcgcaccaaaggagaat
tctaaccagctcaactctgccattaacaatagctggatgctgaactctcgtcagatgaaa
gccatccttgataactatgtccctcctaagggtgccatccagatcccaccagaagccatt
gctaaggccaccgccatggcagcatcccaggatgagctccaagcccagcgtgagggtcat
cccatcctgattgaggaggagagagaactaagggtaccagccttcctacctgatgatggc
tactccagtgatatcatcaagggcattcctaacggtcttagggagttcttcaatccgctc
atacaagctgctcttgtgcgtttgacccctcacccaaaggccaacggtacgtggactgtg
tatatgtatggcaatcaaccatccatcctagattctccaggtccaccatcgcctcagtca
ccaacctccccacaaccaggctctgccccgcaccttgagcctcaagttaaacctgatgct
aagccagctggtaaggagccagaggttgttaccatagaacttaacaaacacggaaagcca
ggcatgggactgagcatcattgcagctaccggagctggtcaagaaaagattggtatctac
gtcaaagcagttgtgccaggatcggctgctgataaggatggcagagtgaaggctggtgat
caaattcttgctgtggatgggaacagtttacttggcctggatcaggatgcagctgcccag
tttctggtcaagtctggacagatcgttgagatgaccatagccaagcaaggtgccattttc
catggtttggctcagattcttagccaggcaacacccccacagcaaagagcttacaaagga
gaaccccgtcagccccgccctgtcagtgaagacttatcagggcgctctggtacccttccc
cctggtatgggtgcccctagggagtctgttgatcctagggacatcgccaccatgcctagg
ggtatgattggcgtgccccttgtgggcctcagagaggccgataaggccaagtcgtccccc
aatctcgctgaggatcgaccaccagaaagaggtaactacatgccaatgacaagcaataac
ggtagagatgactactcccgccatggctctgttggcatgaggcctgaaccaaggagccgt
atggaggcaacccctactccaccaatttcccaaaggtccaagtctgtatctcaccttgac
ccagaaccgatggaacacgaatcccagagaccagtgaagtccactgtggacctttctcaa
aagagagatgagcagccatacagaggtcatgctcccagagaggaaccacccttcaggagg
gaggaggatccacacatgcgtcctggaatgcctgacaaatcacttgaaagttttgaagag
gagccctacagaaggcagccaggatccagaccaggtgatccgagaagggagtctccagac
cctcgaggtcctattccccaacaaaggcctggtcagatgagacctaaccctcaaccacgc
caagttcaacagcagatgcagcatctgcagcagcggcagagaggaccatccccccagcat
ccaggacagtatcctccaggtcaaatgggtcccagaggccctcaacaaagaatgccaatg
ccgcagtcaaggtttccacctggtcagcaaccgggcatgggaccaagaggaccaccacct
caacagcgcatgccggatggagctatgcagcagcaacagccacccaacagatatggccct
ccacctggggtgttcaggattgggcctcaaggagaaatacagaggccagcaccaccgcaa
gactctagagataattatggcatgccaccacgccagaggaattatagtcaaggggatatg
attgatgaccctccagagcccagggcgagggtttacagtgaagggaacacattaaggggg
cctgatcatccaaatggaccccaaccagcacccagaacgattagggaggatcaatctagg
caatatgctcctagtggtccacaaagtgatgatttacctccacctccgccactagatcat
tcagcttcccaaatgcaagataataatgacctccctccaccaccacctcaaaatatggac
gaggaggaggaataccgtcgatggcaggaagagagagccaacagaatgggaggagaccca
tcgagacagtcaccaaactctggtttcgcttctcttcctcgtcaggggcgtattaacaga
tcgtcatcccttactcgtgatacacttccagtgggaagtgaaagtcagccaactccacct
cagcagaagcctcccctgggtccaaaacctgttcctcctcccatgcctcccgagaggacc
aatgcttcagctgaggcagctcgaggatccttggaaaggagacctcctaattccgctcca
ggcatgaatcctacaggttctgcatctctctcgtcaaaaagctctccctgggatagagag
gagaaagaacgtcaagagaagcgacttgaagaacaggttagactgatgagagatgatgaa
attgagtatttgtcttctttgccttcacttactcctgttcaacaagaaagattgaataag
atgaaacttgaccagcagttccagcaacgccttgaagaatccatgatggacaatgaagat
gatgatgaggaagatgatttaacaaagaaaccagagttccagaatcaaatggcaatggca
aatcgaagtgctgagatcgctgcacaaaaagcaagagaacagcagcttgaaagagaaaga
caagaagaaagggaaaatgatatgagaagaaagcaggaaatgagagttcaggaactgcaa
atgcaacggcagcaagaacgtcagagagaaatagaaatgcagagacaacaggagcttcaa
aggcaacaagaattccagagaaaacaagagatgcagcgccagcaagaagtccaaaggcag
caagagctaagggaacaagagttgaggcagcaagaaatgcaaagacagaaggaagctcaa
aggcaacaagaattacaaagacagcaagaaatgcaaagacagcaggaactgcagaggcaa
gaggaaatgcggagaaaagaggatatgcgaaggcaagaggaaatgcggagacaagaggaa
ataagaaggcaagaagagatgcggagacaagaggaaatgcgaagacaggcggaaatgcgt
agacaggaagaaatgcagagacaacaagaagagcaaaggcagcaacagttgcagcggcaa
gaggaagagagacaaagacagttagaggctgacagaagggcacaacaacagcacgaagaa
acaaatgctcagctggagttgaaaaaactacaggaagaacgggcaaaatggattaaagaa
caggaagaactaagacgccaagcagaggaggagcgcaggaaatatgaggagatgaaaaga
ttacgagagcaagaggaagaaatgcagcgaaggcaccagcaacagcgcatggagtttgag
aaacgggcagctgaactggaagaggagagaaggcgtttggaggagatgtcgtttgatgac
ccaccccgccaaatgaatgatatgaacgcttccgtgtcacgaccgggtcagactggcatg
gtccatgctactgttagtgcaggctacgtcccaggaccgaataaaccttatgtccaagca
gcaccacctgaaaggccgccaacagatggatacagtaccacagatgcgaatttcctcaac
aaaccgaaaccattcaagaaggttccccctcccgtagctcccaaacgagtcacattccga
cctggacagcgaccaagtacatctgtggatccactcaataatcttggatcagcaggtgac
cgagggtccatcagttcccaacagagtataagttctaataactccggtggtacaccagcg
ccaccgccccagcagtcaagctttggcaacggctacaccaacaacttccacacagctccc
atgaatgactacatgcacaatcacaatccagcacctccaccaccacctccagcctctgta
aacaataccctgggatacagcacaccaccacagaatggtccaccacctgtctatcgcact
ggggacacccctggggtgataggtgctcaagaagtctacaatgacccaagagataagaga
ctagccaagcaacagttgcagcccaagaatgtctcaccggacatgaaaaacatgtccttt
agggataagatgaaactcttctcggaatcgacgccaaatgaaaagccgaaaacctcaaag
tgggaaagggagttccttgcaatgaatccaagccttcacaccccatag
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integrated database retrieval system
