Lytechinus variegatus (green sea urchin): 121414288
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Entry
121414288 CDS
T11173
Name
(RefSeq) tubulin alpha-1A chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04517
IgSF CAM signaling
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121414288
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121414288
09142 Cell motility
04814 Motor proteins
121414288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414288
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414288
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121414288
04147 Exosome [BR:
lvg04147
]
121414288
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121414288
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121414288
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121414288
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121414288
Exosomal proteins of other body fluids (saliva and urine)
121414288
Exosomal proteins of colorectal cancer cells
121414288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121414288
NCBI-ProteinID:
XP_041463349
LinkDB
All DBs
Position
4:51965720..51973427
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDIVLD
RIRKLADQCTGLQGFLLFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVDEEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcagttcacatcggccaagccggagtccagatcggtaatgcctgc
tgggagttatactgtcttgagcatggcatccagcctgatggtcagatgccctcagacaag
accattggaggtggtgatgactccttcaacaccttcttcagtgagactggagctggcaag
cacgtgccccgtgccgtcttcgtcgatctcgagccaaccgtagtcgatgaggtccgtacc
ggaacttaccgccagctctttcatcctgagcagctgatcaccggtaaggaagatgctgcc
aacaactatgcccgtggccactacacggttggaaaagaaatcatcgatattgtcctcgac
aggatcaggaaactggctgatcaatgcacgggtctacagggtttccttctctttcacagc
ttcggcggtggcaccgggtcagggttctcttcgctgctaatggagcgtctctctgtcgac
tatggaaagaaatccaagctggagtttgccatttacccagctcctcaggtttcaaccgct
gttgttgaaccctacaactccatcttgactacccacactaccctggaacactccgactgt
gctttcatggtcgacaacgaggctatctacgatatctgccgtcgtaaccttgacatcgaa
cgtcccacttacaccaacctcaatcgcttgatgggccagattgtctcctccatcactgca
tctctgcggttcgatggtgccctcaacgttgatttgacagagttccagaccaatctcgta
ccctacccacgcatccatttcccattggcgacctatgccccagtaatctctgccgagaag
gcttaccatgagcagttgactgttgctgagatcaccaatgcatgtttcgagcccgccaac
cagatggtgaagtgcgatccccgtcacggcaaatacatggcctgctgtctcctttaccgt
ggtgatgtcgtccccaaggatgtcaacgccgcaatcgctaccatcaagaccaagcgtacc
attcagttcgtcgactggtgtccaactggtttcaaggtcggtatcaactaccagccaccc
accgtcgttccaggtggtgatcttgccaaggtccagcgtgctgtctgcatgttgagcaac
accaccgctatcgcagaggcatgggctcgtctcgaccacaagttcgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagagggtatggaagaaggagaattctctgag
gctcgcgaagatttggctgctctcgagaaggattacgaagaagtcggtgtcgactccgtc
gatgaagagggagaagaagaaggagaggaatactaa
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