Lytechinus variegatus (green sea urchin): 121414402
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Entry
121414402 CDS
T11173
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03430
Mismatch repair
lvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121414402
03460 Fanconi anemia pathway
121414402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121414402
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121414402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121414402
NCBI-ProteinID:
XP_041463498
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Position
4:complement(58728439..58762673)
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AA seq
752 aa
AA seq
DB search
MAGTIKKLDETVVNRIAAGEVIQRPANALKEMIENSLDAKSTSIQVTVKSGGMKLLQIQD
NGTGIRKDDMDIVCERFTTSKLREFNDLTSISTYGFRGEALASISHVAHVTIVTRTEDSK
CAYKGSFCDGKLKAAVKPCAGNRGTQITVEDLFYNVATRRKALKSASEEHNKISEVVSRY
AIHNAGVAFTLKKSGESTADVRTSQNASTVDNIRSVFGPSVARELLEINHKNSNLAFTLT
GQISNANYSVKRLIFLLFINHRLVDSSSLRKAIEAVYSTYLPKNTHPFIYFSLEIAPQNV
DVNVHPTKHEVHFLHEEAIIEDIQKCLEQKLLGCNSSRTYFTQALLPGSNLSIADDGDKS
KDSSKGPKSSSSDQVYAHHMVRTDSKDQKLDAFLQAAPSTKSSSSSSENHPDKGVGDRSV
VTDSGADGNEGVQRPVVEIPSPALPQRRNDGDGPTLPRKRPHSEVVSDVEGPPSRPGPSD
KDQERESRQSKPKRKEIQLTSVLEIQKEIEANTHDDLRDLVKQHTFVGIVDAEYALIQHK
TKLYLVNTVKLSQELFYQLMLYDFGNFGLMRLSNPAPIFELAMIALDTEDSGWSESDGPK
DQLAQYIVDFLKTKAEMLNDYFSVEIDEEGNLCGIPLVLDKYIPDMEGLPMFILRLATEV
DWDSEKECFQTFAKECSLFYRIQKNSKLADTKGENGSSSDADMPSYNWRWTIEFVIYPAL
KSTLLPPKRFAGDASILQVANLPDLYKVFERC
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaccatcaagaaattagatgagacggtagtcaacagaatagctgctggggaa
gtcattcaaagaccggcaaatgctctcaaagaaatgatagaaaacagcttggatgccaag
tcaacttccattcaagttacagtcaaatcaggaggaatgaaactacttcagatacaagac
aatgggactggtataaggaaagatgacatggacattgtgtgtgaaaggtttacaacaagc
aagttgagagagttcaatgaccttactagcatcagtacatatggcttcagaggagaggca
ttggctagtatcagtcacgttgctcatgttaccatagtaacaagaacagaggattctaaa
tgtgcttacaagggaagcttctgtgatggtaagctaaaggcagcagtcaagccgtgtgcc
ggtaacagaggaacacaaattacagtggaagatctcttctacaacgtcgctacgagaagg
aaagcactgaagagtgcaagcgaggagcacaacaagatctcagaagtcgtctccagatat
gctattcataatgctggtgtggccttcactcttaaaaagtccggggagagcacggctgac
gtgcggacatcccagaatgcatctacagtcgataacattcgaagtgtctttggtccttcg
gtcgcgagggaacttctagaaatcaaccacaagaatagcaatttggcgttcactttgacg
ggtcagatctccaatgcgaactactcggtcaagaggctcatctttctgttgtttatcaat
catcgtttagttgattccagtagtcttcggaaggccatagaagcagtgtacagtacgtac
cttcccaagaacacgcatcccttcatctacttcagccttgagattgccccgcagaatgtc
gatgtcaacgtccatcccaccaaacacgaagtccacttcctccacgaagaggctatcatc
gaggacattcagaaatgcctggaacagaaactcttgggatgtaattcatcaaggacctac
ttcacccaggcattgctacccggatcaaacctctccattgctgatgatggagataagtcc
aaggactcttcaaaaggtcccaaatcgagctcttcagaccaggtctacgcccatcacatg
gtccggacggactccaaggaccagaaattagatgccttcctccaggcagctccttccacc
aagtcatcatcatcctcatctgaaaatcatcctgataaaggtgttggtgataggagcgtg
gtcactgatagtggtgctgatggcaatgagggagttcagcgaccagtggtggaaatcccg
tctcctgctctgcctcaaagaaggaacgatggtgatgggccaacgttgcctaggaaaagg
ccacattcagaagtggttagtgatgttgaaggtcccccatccaggccaggacccagtgac
aaggaccaggaacgggagtctagacagtccaagcctaaacggaaagagatccagctcacc
agtgtccttgagattcagaaggagatagaagctaacacacatgatgatttacgagatctc
gtgaagcagcatacatttgttggaatagtagatgcagagtatgcgttgatacagcacaaa
accaaactatacctggttaatactgttaaactcagccaagaacttttctaccaattaatg
ttatatgacttcggcaactttggacttatgagattatcaaatcctgcaccaatctttgag
ttagcgatgattgccttagacaccgaggacagtggatggagcgagagcgatggccccaag
gatcagctagcccagtacatagtagacttcctcaagaccaaagcggagatgctcaatgac
tatttcagtgttgagattgatgaggaagggaatctatgtggcattcctcttgtgttggac
aagtacatcccagacatggaaggtctccctatgtttatcttgagactagccacagaggtg
gactgggactcggaaaaggaatgttttcagacgttcgccaaggagtgcagtctattctac
agaatacagaagaactcgaagctggcagataccaaaggggaaaatggctcaagctcagat
gctgatatgccttcttacaactggagatggaccattgagtttgtcatctatcccgccctc
aagtctaccctgctaccacccaagagatttgcaggagatgctagcatcctccaggtggct
aatcttccggacctttataaagtatttgagagatgttaa
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