Lytechinus variegatus (green sea urchin): 121414464
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Entry
121414464 CDS
T11173
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414464
03041 Spliceosome [BR:
lvg03041
]
121414464
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121414464
Spliceosome [BR:
lvg03041
]
Complex C
Other components
EJC/TREX
121414464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
121414464
NCBI-ProteinID:
XP_041463580
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All DBs
Position
4:complement(62193342..62208942)
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AA seq
542 aa
AA seq
DB search
MNKSSKINVNASSLVGLKAELFKKQEQLKRDRLQPGSSASSSKNRHGESKKPSIWNKKNA
GVKQRAEKDLEQLANERDELDNARNKLEAKAKFYEKMTKDGFIPENDSDERFLVDFERKA
LDQREEFKRRVEELEREEETNEKEIPPPANPDEEWVDYTDTLGRSRRCMRKDLPNLVSMD
KRLNPEVYKEQEKEAEKKKEDLPDLMSNDMYREMLRKKWEEEEEQAAKGPLGSTHYQNLK
YDEVRDMGVGYFDFSKDQTERNEQMDTLQLLRDETMGQRERREKLKLKRKAAMIARLEKI
KERKRQKGEVIEDEEEKEEEKEEKEDKRLTEGVEKDTKPKESKVREWDIGKEPVSAWEQR
LTNMRDERPAEFAPPSIYNTASHRRGQNQPPLYPPPKDYNSTFPNITTERTVKKPFTPRS
SDISPPDVGYQDSSLDAGQRSKMSLPPPRDYSSVYGRVKETTGQKSSTATWSQWNAPSGS
LELNRPFATGGGFGCTSSGGTSERTTTANTPTATVESVDTRVEDSEGAIASALSFFRKNA
GK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcatcgaaaatcaacgttaatgcctcttcattggttggcttgaaggccgag
ctttttaagaagcaggagcaactaaagagagaccgtcttcaacctggaagcagcgcttca
tccagtaaaaacagacatggagaatctaagaagccatccatctggaacaagaagaatgct
ggagtgaaacaaagagcggagaaggacctagagcagctggcgaatgaaagagatgaactt
gacaatgcaaggaataagttggaagccaaggccaagttttatgagaagatgacaaaagat
gggttcatcccagagaatgattccgatgaaagatttttggttgactttgagaggaaggct
ttggatcaaagagaagaattcaagcggagagttgaagaacttgagagggaagaggagaca
aatgagaaggaaattccaccaccagctaatccagatgaggaatgggtggactacacagac
acactgggacgctcaagacgctgcatgagaaaggaccttcccaatcttgtttctatggat
aagaggctcaatcctgaagtctacaaagaacaagagaaggaagctgagaagaagaaagaa
gatttgccagatctgatgtcaaatgacatgtatcgggagatgcttcggaagaagtgggag
gaggaggaggagcaagcagcgaaagggccgcttggctccacccattatcagaatctgaaa
tatgatgaggtccgtgatatgggcgtagggtactttgacttctccaaggatcagacagag
agaaatgagcaaatggatactttacaactcctccgagatgagaccatgggtcagagggag
aggagagaaaagttgaagctgaagaggaaagctgccatgatagccagactggagaagatc
aaggaaagaaaacgacagaagggagaagtgatcgaagatgaagaggagaaagaagaggag
aaggaggagaaggaagataagagattgacagaaggtgtagagaaggacacaaagcccaag
gagagcaaagtcagagagtgggatattggaaaagagccagtatcagcctgggaacagagg
ctaaccaacatgagggatgagagaccagcggagtttgcccctccgtccatctacaataca
gctagccataggagaggtcaaaatcaaccacctctataccccccgccaaaggactacaac
tctaccttcccaaatataaccacagaaaggactgtcaagaagccttttaccccaagatcg
tcagacatttccccgccagatgttggttatcaggattcctctcttgatgcgggtcaacgg
agcaaaatgagcttgccacctccaagggactattcatcggtgtatgggagggtcaaagaa
acgactgggcagaagtctagcactgctacatggtcacagtggaatgcacccagtgggtca
ttggagttgaatcgaccatttgctacaggaggggggtttggatgtaccagcagtggaggg
acatcagaacggactacaacagcgaatacgcctacagctacagttgagtccgttgataca
agggttgaggatagcgagggagccatagcttcggctttgtcatttttcaggaaaaatgca
ggaaagtga
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