Lytechinus variegatus (green sea urchin): 121414470
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Entry
121414470 CDS
T11173
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03430
Mismatch repair
lvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121414470
03460 Fanconi anemia pathway
121414470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121414470
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121414470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121414470
NCBI-ProteinID:
XP_041463588
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Position
4:62581702..62606564
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AA seq
753 aa
AA seq
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MAGTIKKLDETVVNRIAAGEVIQRPANALKEMIENSLDAKSTSIQVTVKSGGMKLLQIQD
NGTGIRKDDMDIVCERFTTSKLREFNDLTSISTYGFRGEALASISHVAHVTIVTRTEDSK
CAYKGSFCDGKLKAAVKPCAGNRGTQITVEDLFYNVATRRKALKSASEEHNKISEVVSRY
AIHNAGVAFTLKKSGESTADVRTSQNASTVDNIRSVFGPSVARELLEINHKNSNLAFTLT
GQISNANYSVKRLIFLLFINHRLVDSSSLRKAIEAVYSTYLPKNTHPFIYFSLEIAPQNV
DVNVHPTKHEVHFLHEEAIIEDIQKCLEQKLLGCNSSRTYFTQALLPGSNLSIADDGDKS
KDTSKGPKSSSSDQVYAHHMVRTDSKDQKLDAFLQAAPSTKSSSSSSSENHPDKGVGDRG
VVTDSGADGNEGVQRPVVEIPSPALPQRRNDGDGPSLPRKRPHSEVGSDVEGPPSRPGPS
DKDQEPESRQSKPKRKEIQLTSVLEIQKEIEANAHDDLRDLVKQHTFVGIVDAEYALIQH
KTKLYLVNTVKLSQELFYQLMLYDFGNFGLMRLSNPAPIFELAMIALDTEDSGWSESDGP
KDQLAQYIVDFLKTKAEMLNDYFSVEIDEEGNLCGIPLVLDKYIPDMEGLPMFILRLATE
VDWDSEKECFQTFAKECSLFYRIQKNSKLADTKGENGSSSDDDMPSYNWRWTIEFVIYPA
LKSTLLPPKRFAGDASILQVANLPDLYKVFERC
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaccatcaagaaattagatgagacagtagtcaacagaatagctgctggggaa
gtcattcaaagaccggcaaatgctctcaaagaaatgatagaaaacagcttggatgccaag
tcaacttccattcaagttacagtcaaatcaggaggaatgaaactacttcagatacaagac
aatgggactggtataaggaaagatgacatggacattgtatgtgaaaggtttacaacaagc
aagttgagagagttcaatgaccttacaagcatcagtacatatggcttcagaggagaggca
ttggctagtatcagtcacgttgctcatgttaccatagtaacaagaacagaggattctaaa
tgtgcttacaagggaagcttctgcgatggtaagctaaaggcagcagtcaagccgtgtgcc
ggtaacagaggaacacaaattacagtggaggatctcttctacaatgtcgctacgagaagg
aaagcactgaagagtgcaagcgaggagcacaacaagatctcagaagtcgtctccagatat
gctattcataatgctggtgtggccttcactcttaaaaagtccggggagagcacggctgac
gtgcggacatcccagaatgcatctacagtcgataacattcgaagtgtctttggtccttcg
gtcgcgagagaacttctagaaatcaaccacaagaatagcaatttggcgttcactttgacg
ggtcagatctccaatgcgaactactcggtcaagaggctcatctttctgttgtttatcaat
catcgtttagttgattccagtagtcttcggaaggccatagaagcagtgtacagtacgtac
cttcccaagaacacgcatcccttcatctacttcagccttgagattgcccctcagaatgtc
gatgtcaacgtccatcccaccaaacacgaagtccacttcctccatgaggaggctatcatc
gaggacattcagaaatgcctggaacagaaactcttaggatgtaattcatcaaggacctac
ttcacccaggcattgttacccggatcaaacctctccattgctgatgatggagataagtcc
aaggacacttcaaaaggtcccaaatcgagctcttcggaccaggtctacgcccatcacatg
gtccggacggactccaaggaccagaaattagatgccttcctccaggcagctccttccacc
aagtcatcatcatcctcctcatctgaaaatcatcctgataaaggtgttggtgataggggc
gtggtcactgatagtggtgctgatggcaacgagggagttcagcgaccagtggtggaaatc
ccgtctcctgctctgccccaaagaaggaatgatggtgacgggccaagtttgccaaggaaa
aggccacattcagaagtgggtagtgatgttgaaggtcccccatccaggccaggacccagt
gacaaggaccaggaaccggagtctagacagtccaagcctaaacggaaagagatccagctc
accagtgtccttgagattcagaaggagatagaagctaacgcacatgatgatttacgagat
ctcgtgaagcagcatacatttgttggaatagtagatgcagagtatgcgttgatacagcac
aaaaccaaactatacctggttaataccgttaaactcagccaagaacttttctaccaatta
atgttatatgacttcggcaactttggacttatgagattatcaaatcctgcaccaatcttt
gagttagcgatgattgccttagacaccgaggacagtggatggagcgagagcgatggcccc
aaggatcagctagcccagtacatagtagacttcctcaagaccaaagcggagatgctcaat
gactatttcagtgttgagattgatgaggaagggaatctatgtggcattcctcttgtgttg
gacaagtacatcccagacatggaaggtctccctatgtttatcttgagactagccacagag
gtggactgggactcggaaaaggaatgttttcagacgttcgccaaggagtgcagtctattc
tacagaatacagaagaactcgaagctggcagataccaaaggggaaaatggctcaagctca
gatgatgatatgccttcttacaactggagatggaccattgagtttgtcatctatcccgcc
ctcaagtctaccctgctaccacccaagagatttgcaggagatgctagcatcctacaggtg
gcaaatttaccggacctctacaaagtctttgagagatgttaa
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