Lytechinus variegatus (green sea urchin): 121414508
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Entry
121414508 CDS
T11173
Name
(RefSeq) tubulin alpha-1 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121414508
09142 Cell motility
04814 Motor proteins
121414508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414508
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414508
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121414508
04147 Exosome [BR:
lvg04147
]
121414508
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121414508
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121414508
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121414508
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121414508
Exosomal proteins of other body fluids (saliva and urine)
121414508
Exosomal proteins of colorectal cancer cells
121414508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121414508
NCBI-ProteinID:
XP_041463648
LinkDB
All DBs
Position
4:63992455..63996592
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLAVYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVDAEGEEEEGDEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcagtccacgtcggccaagccggagtccagatcggtaacgcctgc
tgggagttgtactgccttgagcacggcatccagcctgatggtcagatgccctcagacaag
accatcggaggtggtgatgactccttcaacaccttcttcagtgagactggagctggcaag
cacgtcccccgtgccgtcttcgttgatctcgagccgactgtagttgatgaggttcgtacc
ggaacctaccgccagctcttccaccctgagcagttgattacaggcaaggaggatgctgcc
aacaactacgctcgtggtcactacaccgtcggaaaggaacttatcgatattgtcctcgac
aggatcaggaagctggctgaccagtgcacaggtctccagggattcctcatcttccacagc
ttcggtggtggcaccggttccggcttcacctccttgttgatggaacggctatccgtcgac
tacggaaagaagtccaagctcgaattcgccgtctaccccgctcctcagatatcaactgcc
gtcgtcgagccctacaactcaatcctaacaactcacacaactctagagcactctgactgt
gccttcatggtcgacaacgaggcaatctacgatatctgccgtcgtaacctcgacatcgag
cgacctacgtacaccaatctgaaccgtctcatcggccagattgtctcctccatcactgct
tctctgaggttcgatggcgccctcaacgtcgatcttacagaattccagaccaacttggtg
ccctatccacgtattcacttcccccttgccgtctatgccccggtaatttctgctgaaaag
gcctaccacgagcagctgacagttgccgagatcaccaatgcttgtttcgagcccgccaac
cagatggtaaagtgtgaccctcgtcacggcaagtacatggcctgctgtctcctgtaccgt
ggtgatgtcgtccccaaggatgtcaacgccgccattgctaccatcaagaccaaacgtacc
atccagttcgtcgactggtgtccaactggcttcaaggtcggtatcaactaccagccaccc
accgtcgttcctggtggtgatcttgccaaggttcagcgtgccgtctgcatgttgagcaac
actaccgccatcgccgaggcttgggcccgtctcgaccacaaattcgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagagggtatggaagaaggagagttctctgag
gctcgtgaagatttggctgctctcgagaaggactacgaagaagtgggtgtcgattccgtc
gatgcagaaggagaagaggaagaaggtgacgagtattaa
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