Lytechinus variegatus (green sea urchin): 121414524
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Entry
121414524 CDS
T11173
Name
(RefSeq) tubulin alpha-1 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121414524
09142 Cell motility
04814 Motor proteins
121414524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414524
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414524
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121414524
04147 Exosome [BR:
lvg04147
]
121414524
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121414524
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121414524
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121414524
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121414524
Exosomal proteins of other body fluids (saliva and urine)
121414524
Exosomal proteins of colorectal cancer cells
121414524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121414524
NCBI-ProteinID:
XP_041463667
LinkDB
All DBs
Position
4:complement(64362039..64365508)
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLAVYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSVDAEGEEEEGDEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctatccacgtcggccaagccggagtccagatcggtaacgcctgc
tgggagttgtactgccttgagcatggcatccagcctgatggtcagatgccctcagacaag
accatcggaggtggtgatgactccttcaacaccttcttcagtgagactggagctggcaag
cacgtcccccgtgccgtattcgtcgatctcgaaccaaccgtagtcgatgaggttcgtaca
ggaacataccgacagctcttccaccctgagcagctgatcaccggcaaggaggatgctgcc
aacaactacgcccgtggtcactacaccgtcggaaaggaactgatcgatattgtgctcgac
aggatcaggaagctggctgaccagtgcacaggtctccagggattcctcatcttccacagc
ttcggtggtggcaccggctctggcttcacctccctgctcatggagcgtctttcagttgac
tacggaaagaagtccaagctggagtttgccatctacccagcacctcaggtatctaccgcc
gtcgtcgagccttacaactcaatcctcactactcacaccaccctcgagcactccgactgt
gccttcatggtcgacaacgaggccatctacgatatctgccgtcgtaacctcgacatcgag
cgacctacctacaccaacctgaaccgtctcatcggccagatcgtctcctccatcaccgct
tctctgcggttcgatggtgccctcaacgtcgatcttaccgagttccagactaacttggtg
ccctacccacgtatccatttccctcttgccgtctatgccccagtcatatctgctgagaag
gcataccacgagcagttgaccgttgccgagatcactaatgcttgcttcgagcccgccaac
cagatggtgaagtgtgaccctcgtcatggcaaatacatggcctgctgtctcctgtaccgt
ggtgatgtcgtccccaaggatgtcaacgccgccattgctaccatcaagaccaagcgtacc
attcagtttgtcgactggtgtccaactggcttcaaggtcggtatcaactaccagccacca
accgttgtccctggcggtgatcttgctaaggtacagcgtgccgtttgcatgttgagcaac
accaccgccatcgccgaggcctgggctcgtctcgaccacaagttcgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagaaggtatggaggaaggagagttctccgag
gctcgtgaagatttggctgctctcgagaaggactacgaagaagtcggcactgactccgtc
gacgcagagggagaagaagaagaaggcgacgagtattaa
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