Lytechinus variegatus (green sea urchin): 121414527
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Entry
121414527 CDS
T11173
Name
(RefSeq) tubulin alpha-1 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04517
IgSF CAM signaling
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121414527
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121414527
09142 Cell motility
04814 Motor proteins
121414527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414527
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414527
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121414527
04147 Exosome [BR:
lvg04147
]
121414527
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121414527
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121414527
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121414527
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121414527
Exosomal proteins of other body fluids (saliva and urine)
121414527
Exosomal proteins of colorectal cancer cells
121414527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121414527
NCBI-ProteinID:
XP_041463671
LinkDB
All DBs
Position
4:complement(64388381..64395099)
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYSPVISAEKAYHEQLTVSEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVDAEGEEEEADEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctatccacgtcggccaggccggagtccagatgggcaacgcctgc
tgggaattgtactgccttgagcacggcatccagcctgatggtcagatgccctcagacaag
accatcggaggtggtgatgactccttcaacacattctttagtgagactggagctgggaag
cacgtcccccgtgccgtattcgtcgatctcgagccaaccgtagttgatgaagttcgcact
gggacctaccgtcagctattccaccctgagcagctgatcaccggcaaggaggatgctgcc
aacaactacgcccgtgggcactacaccgtcggaaaggaactgattgatattgtcctggac
aggatcaggaagctggctgaccagtgcacaggtctccagggattcctcatcttccacagc
ttcggtggtggcaccggctctggcttcacctctctgttgatggaacggctctccgtcgac
tatggaaagaagtccaagctggagtttgccatctatcctgctccccagatctctacggct
gttgttgaaccctacaactcaattctaacaacacataccaccctggagcactccgactgt
gccttcatggtcgacaacgaggccatctacgatatctgcagacgaaaccttgacattgag
cgacctacctacaccaacttgaaccgtctcatcggccagatcgtctcctccatcactgct
tctctaaggttcgatggcgccctcaacgtcgatcttactgagtttcagaccaacttagtg
ccctatccccgtatccatttcccacttgccacatattcaccagtcatctctgctgaaaag
gcctaccacgaacagctgaccgtttccgagatcactaactcttgctttgagcctgccaat
cagatggtgaagtgtgacccccgtcacggcaaatacatggcctgctgtcttctgtaccgt
ggtgacgtcgtcccaaaggacgtcaacgccgccatcgctaccatcaagacaaagcgtacc
attcagttcgtcgactggtgtccaactggcttcaaggttggtatcaactaccagccacct
accgttgtccctggcggtgatcttgccaaggttcagcgtgccgtctgcatgttgagtaat
actaccgccattgccgaggcttgggcccgcctcgaccacaagtttgatttgatgtacgcc
aagcgcgccttcgtccattggtacgtcggagagggtatggaggaaggagagttctctgag
gctcgtgaagatttggctgctctcgagaaggactacgaagaagtcggcgttgattccgtc
gacgcagagggagaggaggaggaagctgatgaatattag
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