Lytechinus variegatus (green sea urchin): 121414529
Help
Entry
121414529 CDS
T11173
Name
(RefSeq) tubulin alpha-1 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04517
IgSF CAM signaling
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121414529
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121414529
09142 Cell motility
04814 Motor proteins
121414529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121414529
03036 Chromosome and associated proteins [BR:
lvg03036
]
121414529
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121414529
04147 Exosome [BR:
lvg04147
]
121414529
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121414529
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121414529
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121414529
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121414529
Exosomal proteins of other body fluids (saliva and urine)
121414529
Exosomal proteins of colorectal cancer cells
121414529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121414529
NCBI-ProteinID:
XP_041463673
LinkDB
All DBs
Position
4:complement(64399871..64407703)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPSVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDQVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQISTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGLDSADGEEEEADEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcagtccatgtcggccaagccggagtccagatgggcaacgcctgc
tgggagttgtactgcctagagcacggcatccagcctgatggtcagatgccctcagacaag
accatcggaggtggtgatgactccttcaacaccttcttcagtgagactggagctgggaag
cacgtcccccgtgcagtgttcgtcgatctcgagccatctgttgtggatgaggttcgtacc
ggtacataccgtcagctcttccatcctgagcagctgatcaccggcaaggaggatgctgcc
aacaactatgcacgtggtcactacacggtcgggaaggaactaattgaccaagttctggat
cgcatcaggaagctggctgaccagtgcacaggtctccagggattcctcatcttccacagc
ttcggcgggggcactggttccggcttcacttctttgttgatggaacgtctttccgtcgac
tacgggaagaagtccaagctagagttcgcggtctaccctgcaccccagatctccacggct
gttgtcgaaccctacaactcagttctcacaactcacaccacacttgagcactccgactgt
gccttcatggtcgacaacgaggccatctacgatatctgcagacgtaaccttgacatcgag
cgacctacctacacaaacctgaaccgtcttatcggccagatcgtctcctctatcaccgct
tctctacggtttgatggtgctctcaatgttgacctaacagagttccagaccaacttggtg
ccatacccacgtatccatttccctctggctacctatgccccagtcatctctgctgagaag
gcctaccatgagcagctgaccgtcgcagagattactaatgcctgcttcgagcctgccaac
cagatggtcaaatgcgatccccgtcatgggaagtacatggcttgctgtcttcttttccgt
ggtgatgtcgttcccaaggatgtcaacgccgccattgctaccatcaagaccaaacgttcc
atccagttcgtcgattggtgtccaactggcttcaaggtaggtatcaactaccaaccaccc
accgtcgtccctggtggtgatctcgccaaggttcagcgtgccgtctgcatgttgagcaac
acaaccgcagtagctgaagcatgggcccgtctcgatcacaagttcgatctgatgtacgcc
aaacgtgctttcgtccattggtacgtcggagagggtatggaggaaggagagttctctgag
gctcgtgaagatttggctgctctcgagaaggactacgaagaagtcggacttgattctgct
gatggagaggaggaggaagcagatgaagaatactaa
DBGET
integrated database retrieval system
