Lytechinus variegatus (green sea urchin): 121414962
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Entry
121414962 CDS
T11173
Name
(RefSeq) glycine receptor subunit alphaZ1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04080
Neuroactive ligand-receptor interaction
lvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121414962
04082 Neuroactive ligand signaling
121414962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121414962
Ion channels [BR:
lvg04040
]
Ligand-gated channels
GABA-A
121414962
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
GldB_lipo
Motif
Other DBs
NCBI-GeneID:
121414962
NCBI-ProteinID:
XP_041463944
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Position
1:44376247..44415219
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AA seq
489 aa
AA seq
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MKYGGVTYVFLFLVVVPLIEQCQAASKSNDDDVRELQNQTVTILNGILDGYDKRLRPGFG
GPPITVRVSMYVYSMGPVTEAKMEYTMDLYFRQQWRDERLQFNADFGLALNAEILDSFWI
PDIYIINEKSANYHTILYKNSLLRIEPNGDMLFSTRLTITASCNMDLSHFPFDKQRCSLD
MESYAYSDNDVQFIWLENSPVYVDPAISLPQFKFLASSTRSRIAEYFVGNYTVVSADFFL
GRDITYYVIQTYIPSSMITCLSWLSFWINRNAVPARVALGITTVLTMTTLVGNAGNSLPK
LSYIKAIDLFLGMCYIFVFAALLEYVVVIYYDQPRYQKARQLMKEFLENGQTAKEDAAKT
IDVAIDIEDEGNSRSRSEQNGRTSSRPPTSQDISRSMQADAKRKSGDDYGFIEGKVSKEE
PDCMEETLCSYTQSFREKICVFGFNPYSVDRVSRIVFPLVFFTLNLIYWLVYLVFDNITV
EDLKHTNTL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacggaggggtgacgtatgtcttcttattcctcgtcgttgtgcccctgatcgaa
caatgccaagcagcttcgaaatcaaacgatgacgacgtaagagaattacagaatcaaacg
gtcacaattttaaacgggatacttgatggttatgataaaaggttacggcctgggttcgga
ggaccacctattacggttcgtgttagcatgtatgtttacagcatgggaccagtgacagag
gccaaaatggagtacacaatggacctttacttccgtcaacaatggcgtgatgagagatta
caattcaatgctgactttggtttggctctaaatgcagagattctcgatagtttttggata
cctgatatctatattataaatgagaaatcagccaattatcataccatcctttataagaat
tctctccttcgtattgaacccaacggagacatgctcttcagtacaagattgaccattacg
gctagttgtaacatggatctttcacactttccctttgataaacaacgctgttccctagac
atggaaagctatgcatacagcgataatgatgttcaatttatttggcttgaaaatagtcca
gtctacgttgatcctgctatttcactacctcagtttaaattcctagcctcaagtacccgt
tcaagaatcgctgaatactttgttgggaactacacggtcgtcagtgccgacttcttcctc
gggcgtgacatcacttattacgtcatccagacttacattccgtcatcaatgatcacgtgt
ttatcatggctatcattttggatcaaccgcaatgccgtaccggctcgtgttgctcttggt
attactacggtactgacgatgaccacgctggttggcaatgcaggcaactccctccctaag
ttatcttatattaaagctatcgacttgtttcttggaatgtgttatattttcgtgtttgct
gccctcttggagtacgtagtcgttatttattatgatcaacctcgttaccagaaagctcgt
caactcatgaaagagttcttagagaatggacaaacagcaaaagaagatgcagccaagaca
attgacgtggctattgatatagaagacgaaggaaactcacgatcacgatccgaacaaaac
ggacgaacgtcgagtcgacctcctacatcacaggacatctcccggagcatgcaggcggat
gccaagcgaaaatcgggcgacgattacgggttcattgagggcaaggtatctaaagaagag
ccagattgcatggaagagactctgtgctcgtacacgcagtcgttcagggaaaagatttgc
gtctttgggttcaacccgtactccgtcgatagggtatctcgtatcgtcttcccgctcgtg
tttttcaccctaaatctaatatactggttggtctatttagtctttgataacattacagtt
gaagatctcaaacacacgaacacattataa
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