KEGG   Lytechinus variegatus (green sea urchin): 121415104
Entry
121415104         CDS       T11173                                 
Name
(RefSeq) cyclin-dependent kinase 7-like
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03022  Basal transcription factors
lvg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121415104
  09124 Replication and repair
   03420 Nucleotide excision repair
    121415104
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lvg01001]
    121415104
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lvg03021]
    121415104
   03019 Messenger RNA biogenesis [BR:lvg03019]
    121415104
   03400 DNA repair and recombination proteins [BR:lvg03400]
    121415104
Enzymes [BR:lvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     121415104
    2.7.11.23  [RNA-polymerase]-subunit kinase
     121415104
Protein kinases [BR:lvg01001]
 Serine/threonine kinases: CMGC group
  CDK family
   121415104
Transcription machinery [BR:lvg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121415104
Messenger RNA biogenesis [BR:lvg03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     121415104
DNA repair and recombination proteins [BR:lvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121415104
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like ABC1 Seadorna_VP7
Other DBs
NCBI-GeneID: 121415104
NCBI-ProteinID: XP_041464134
LinkDB
Position
5:complement(4323961..4370425)
AA seq 349 aa
MARGMLAGDRSKLYENIDFLGEGQFATVYKARDLQHDGRIVAVKKIKLGHRSEAQDGINR
TALREIKLLQELRHENIIGLLDCFGQRSNISLVFDFMETDLEVIIKENSLVLTPAHIKAY
TMMALRGLEYLHSNWILHRDMKPNNLLLDEGGVLKIGDFGLAKFYGSPNRIYTHQVVTRW
YRCPELLFGARIYGTGVDMWAMGCILAELLLRVPFFPGESDLDQLSRIFQTIGTPSEEEW
PNMSALADYIEFKKFPGTPLRDIFTAATDDLLTLLKGLLLMDPCRRCKATEALKMPYFYN
KPAPTPGHLLPRPGMLAPVDNSKPQTKLGSKRKMADDIGTGSTAKKLVF
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcccggggtatgctagcaggagaccgttcgaagctgtatgagaacatagacttttta
ggtgaaggtcagtttgctacagtttacaaagctcgagatcttcagcacgatggcagaata
gtagcagtgaaaaagataaagcttgggcatagatccgaagcacaggatggcataaacagg
acggctctcagagaaatcaaattgctccaagaacttaggcatgaaaatataattggactt
cttgactgttttggtcagcgatccaacatcagccttgtgtttgacttcatggagacggac
ctagaggttatcataaaggaaaatagcttggtattgacccccgcccacatcaaggcctat
acgatgatggcattaagaggtctagagtatctccattccaattggatcttacatagggat
atgaagcccaacaatttactgcttgatgagggcggggtgctgaagattggtgattttggt
cttgcaaagttttatggcagtcccaacaggatatacacacatcaagtcgtaacgaggtgg
tacagatgtccagagctgttgtttggggcgaggatctacggcacgggggtggacatgtgg
gccatggggtgcatcctagcagaactgctccttcgggttcccttcttccccggagaatcg
gatctggaccagttgagcaggatcttccagacgatagggacgccatcagaagaagaatgg
ccgaacatgtcagccctggcagactatattgagttcaagaagtttcctggtactcctctg
cgggatatctttactgccgctaccgatgacctcttgacccttctcaaagggctccttctc
atggacccttgcaggcgatgcaaagccactgaggctcttaagatgccctacttctataac
aagccagccccgacaccaggccacctcctacctaggccaggaatgctagccccagtggac
aacagcaagccacaaaccaagctcggtagcaaaagaaagatggccgatgatataggaaca
gggtcaactgcaaagaaacttgtcttctga

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