Lytechinus variegatus (green sea urchin): 121415138
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Entry
121415138 CDS
T11173
Name
(RefSeq) scavenger receptor class B member 1-like
KO
K13885
scavenger receptor class B, member 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03272
Virion - Hepatitis viruses
lvg04145
Phagosome
lvg04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121415138
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121415138
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121415138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121415138
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121415138
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Phagocytosis
Scavenger receptors
121415138
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121415138
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Gene cluster
GFIT
Motif
Pfam:
CD36
TPR_24
Motif
Other DBs
NCBI-GeneID:
121415138
NCBI-ProteinID:
XP_041464206
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Position
1:complement(45953071..46005226)
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AA seq
392 aa
AA seq
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MSEVRSNKLICCGVTGTIMACIGIVLIPITDVVILKIMEQEGTLVPSSLAYPLWEEVPIP
IYFQFWFWNLTNPEEFLKGGPARLEELGPYTYREYRPKVNITHYDNGTVSYLNKKSFVFD
LDMSVGPESDTFIAVNSPVFTIANWLKNAPDLIQKAWQLIHELSKADVIIELSVGGFIWG
YPEKYLELAQRILGEDIVPFTNFGILMGYNNSDDGIWSVYTGQDDLMKLNQMDMWNRERL
LSWWTTDYANALNGTDGTIMHPFVDKDEEVYVYSTYVCRSGLLLFEGYREFRGVWLYYFS
APEYLYANASIHPPNIDFCTPDQTTCPPSGLINVSVCYFQAPIYLSSPHFLYGDDMLFDD
VIGMKPNFNIHGLEAEIEPVKTFYFIYLPFCV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtacgatccaataaactgatttgttgtggtgtgacaggaacgatcatggca
tgtatcggtatcgttcttattcctatcacagatgtcgtcattttaaagatcatggagcag
gaaggaaccctagtccccagttctcttgcctatcctctatgggaagaggtccctattcca
atatattttcagttctggttctggaatctcaccaatcctgaggaattcttgaaaggagga
ccagcgagactagaagaacttggaccttatacatatagagagtatcgtccaaaggttaac
ataacccactatgataatgggacagtcagctacctgaacaagaaaagttttgtctttgat
cttgacatgtctgtcggtcctgaatcagataccttcattgcagttaacagccctgttttt
actattgctaattggctcaagaacgcccctgacctgatccagaaagcttggcaactaatt
cacgagttatctaaagctgatgtcataatagaactgtcagttggaggcttcatatggggc
tatccagaaaagtatttagaattagcacaaaggatccttggtgaagacatcgttcctttc
acaaactttggcatcctgatggggtataataacagtgatgatggtatatggtctgtgtat
actggtcaagacgatctcatgaagcttaatcagatggatatgtggaatagagagaggtta
ctatcatggtggactacagactatgctaatgccttaaatggcactgatggaacgataatg
catccattcgtagataaagacgaagaagtgtatgtctactccacatatgtgtgtcggtct
ggtctattgctgtttgaaggctacagagagtttcgtggtgtatggctctattattttagc
gcacctgaatatctgtatgcgaacgccagtatacacccacctaatattgatttttgcact
cctgaccaaaccacttgtcccccttctggattgattaacgtcagtgtatgttatttccaa
gcacccatctacctatcatcaccacattttctctacggagacgacatgttatttgatgac
gtcattggtatgaaaccaaactttaacatccatggactggaggccgaaattgaaccggta
aaaacgttttatttcatatatcttcccttttgtgtttga
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