Lytechinus variegatus (green sea urchin): 121415172
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Entry
121415172 CDS
T11173
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121415172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121415172
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
GTPases
121415172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
121415172
NCBI-ProteinID:
XP_041464252
LinkDB
All DBs
Position
5:complement(7189508..7227659)
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AA seq
1212 aa
AA seq
DB search
MRSVSIQKLAQLQSDVDKIRNICILAHVDHGKTTLADALISSNGIISTRMAGKLRYMDSR
EDEQLRGITMKSSAISLLYSTSPEEEYLVNLIDSPGHVDFSSEVSTAVRLCEGALVVVDV
VEGVCPQTHVVLRQAWLEHIKPCLVLNKIDRLISELKYTPMEAHLHLQQVLEQVNAVVGN
LYASHVLEKASSKSEDPIQTKEKVSVGESKDGEEQVYDWSDGLEDTDDSHIYFSPDQGNV
IFASALDGWGFSINHFAEMYASKLGVRADVLRKTLWGDFYLHTKSKRIMKGAQAKAKKPL
FVQFVLENIWSLYNTVIVRKDKEKMEKIVKSLGLKLAPRDLRHNDTRICLQAICTQWLPV
SKAVLSMVCSKLPSPTNVNEERIEKLMCSSGQRFDSLHPESQQLKQAFQMSTSDSDAPVI
VYISKMVAVDHSMLPQNRQRPLTCAEIQQRREEARKRHAERRAAAEQDKGGVGGGGDMLT
SQEETSSTDMVESTDLTVEPEAEEEKKSGETFLAFGRVFSGTIHKGQKLFVLGPRHDPQK
ALAETSEHGCCLSPDMECSRYIAEFTVDSLYLLMGRELELLEKVPAGNILGIGGLDEIVL
KSATISSSLACPAFTDMTFAAPPIVRVAVEPKHLSDMQALMKGMKLLNQADPCVEVYVQE
TGEHVIVAAGEVHLERCLDDLRKRFAKVEIDVSPPIIPFRETIIPRPKIDMVNEVIDDIN
QVHREVRSMNIDDDDLRILKNGLVEIKTSNDACTFRIRAVPLPEAVTSLLEESTELIRLL
DHYVSSVLSGKANDQAGSIGLSPTVIASLQDLRSKLEEAFDAAGKKWRGCLDGIWAFGPR
RCGPNILVNKIEDYRRLSMWDCLEEGGTQEEGVLREFDNSVVSGFQLATLAGPICEEPMM
GVCFVIEKWEMDKTLMSKGLADNTNLRTKKKSDLSVVSLEQSVCDATENDRITESHLDDS
NMTQCNISSKVTSQPRTISIPQGTSTENMNNPQEPKIGSLTIHSPLSSPILSSPPLGSPP
LFGSPLPHSPTRGLHPYHQPQQQVVYGPLSGQVISTIKEGCRVAFQTQPQRLMAAMYKCD
IQATAEVLGRMYGVLSKRNGRILQEEMREGSDVFEIVAVLPVAESFGFAEDIRKKTSGLA
SPQLFFSHWEVVPSDPYWEPSTEEELLHFGEKADYENQAKKYMNGVRRRKGLRVEEKIVE
HAEKQRTLSKNK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagatctgtctccatccagaagcttgcccaattacagagtgatgttgacaagatcaga
aacatttgtatcctagcacacgttgatcatggtaagactaccttggcggatgctctcatc
tccagtaatgggatcatctccacccgtatggccggcaagctgaggtacatggacagccgc
gaagatgaacagctgcgaggcatcaccatgaaatccagtgccatctcccttctctatagc
actagtccagaagaggagtatctggtgaatctgattgactccccggggcatgtggatttt
tccagtgaagtttctaccgctgtcaggctgtgcgagggagccctagtagtcgtcgatgtc
gtagaaggagtctgcccacagactcatgtcgtcttaaggcaggcctggctggagcacatc
aaaccgtgcctggtgctgaacaagatagatcggttgatcagtgagctcaagtacacaccc
atggaagcacatcttcatcttcagcaggtcctggagcaagtcaatgctgtcgtaggaaac
ctgtacgcttcacatgtcctagagaaggcttcaagtaaaagtgaagaccccattcagact
aaagaaaaagtgagtgttggagagagcaaggatggagaagagcaggtgtatgattggagc
gatggtttggaggacaccgacgactctcatatatacttttcgccggatcaaggaaatgtg
atctttgcaagtgcattggacggatggggtttcagtattaaccactttgctgaaatgtat
gccagcaaactcggtgtgagggcagatgttctacgcaagactctctggggagatttttac
ctccacactaaatcaaagaggatcatgaaaggagctcaggctaaagccaagaagcctcta
tttgtgcagtttgtattggagaacatatggtcgctttataacacagtaatagtcaggaaa
gataaagagaagatggagaagattgtcaaatctcttggattgaagcttgctccccgcgac
cttcgacacaacgataccaggatctgtctacaggcgatctgcacgcaatggctgccagtg
tcaaaggctgttctgtccatggtatgtagtaagctgcctagtcccactaatgtaaatgaa
gagagaatagagaaactcatgtgcagcagtgggcagaggtttgactcgcttcatccagaa
tctcaacaactcaaacaagctttccagatgtctacctctgactcggatgccccagtcatt
gtttatatctccaaaatggtagctgttgatcatagtatgctaccacaaaacagacaaaga
ccgttgacttgtgctgagatacaacagaggagagaggaagcaagaaagaggcatgctgag
agaagagctgcagcagagcaggacaaaggaggggttggaggaggaggagacatgttgact
tctcaggaagaaacatcatcaacagacatggtagaatcaacagacttgacagtggaacca
gaagccgaggaggaaaagaagtctggagagacgttccttgcatttgggcgggtcttcagt
gggaccattcataaaggacagaaactctttgttcttggaccgaggcatgatcctcaaaag
gcgttggctgagacatcagaacatggatgctgtttatcaccagacatggagtgcagtcga
tacatagcagagtttacagttgatagtctatatcttttgatgggtagagaattagaactc
cttgagaaagttcctgctggaaacatattgggtattggtggccttgatgagatagtgctg
aagtcagcgaccatttcgagcagccttgcctgtccggcattcacagacatgacctttgca
gctccacccatagtcagagtagcagtggaacccaaacacttatctgatatgcaggcattg
atgaaaggcatgaagctgttaaaccaggctgatccgtgcgtggaggtgtatgtacaggag
acgggggaacatgtcatagtggccgccggggaagtccatctagagagatgcttggatgac
ctcaggaagaggtttgccaaagtagagattgatgtttcccctccaatcattccattccgt
gagaccatcatcccgcgtcccaagattgacatggtgaacgaggttatagacgacatcaac
caggtacatagagaggtgcgttctatgaacatcgatgatgatgacctcaggatattgaag
aatggtctggtggagatcaagacctccaatgatgcatgcacctttcgcatcagggcagtc
cctcttccagaagcggtgacaagtttacttgaggagagcacggagttgatcaggttactg
gaccattatgtttcatcggttttatcagggaaggcgaatgatcaagcaggaagcataggt
ctgtctcccacagtgatagctagtttgcaggatctcagatccaaactggaggaagctttc
gatgcagctgggaagaagtggagggggtgcctggatgggatatgggcgtttggaccacgc
cgatgcggtccgaacattctggtgaacaagatcgaagactacaggaggctgtccatgtgg
gactgcttggaagagggtggcactcaggaggaaggtgtcctgagggagtttgataacagc
gttgtgagcggtttccagctggcgacccttgcggggccgatctgtgaggaacctatgatg
ggagtgtgctttgttatagagaagtgggaaatggacaagaccttgatgagcaaaggtctc
gcagacaacactaatcttcggactaaaaaaaaatctgacctcagtgtagtgtccttagaa
caaagtgtgtgtgacgccacagagaatgacagaataacagaatctcatttagatgacagc
aacatgacgcagtgcaatattagtagtaaagtgacctcccagcctagaactatatccata
ccccaagggacttctacagaaaatatgaacaacccccaagagccaaagatcggatccttg
acaatccactcccccctctcatcgccgatcctctcatctccacctctaggctctccaccc
ctatttggctcccccttaccgcatagccccacccggggtttgcacccctaccaccagccg
caacaacaggtggtatatggccccctctcggggcaggtgatctctaccatcaaggaaggg
tgtcgcgtagccttccagacgcagccccagagactgatggcagccatgtacaagtgtgac
atccaagccacagccgaggtgctaggtcggatgtacggtgtgttgtccaagcgaaatggt
cgcatcctgcaggaggagatgagagagggttctgatgtctttgagattgtggcagtgctt
cccgttgctgagagctttggctttgcagaggatattcggaagaagaccagcggtctagca
agtccacaacttttcttcagccattgggaggtggtaccgagtgatccatactgggagcca
tccacagaggaagagctccttcacttcggagagaaagccgactacgagaaccaggccaag
aagtacatgaacggcgttcgcagacgaaaggggctgcgcgtggaagagaagatcgtcgaa
catgccgaaaaacagcgaacactgagcaagaataaatga
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integrated database retrieval system
