Lytechinus variegatus (green sea urchin): 121415314
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Entry
121415314 CDS
T11173
Name
(RefSeq) dynein regulatory complex subunit 6-like
KO
K10279
dynein regulatory complex subunit 6
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121415314
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121415314
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121415314
Cilium and associated proteins [BR:
lvg03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
121415314
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
LRR_EndoS
F-box
LRR_At5g56370
LRR_14
LRR_8
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_1
Motif
Other DBs
NCBI-GeneID:
121415314
NCBI-ProteinID:
XP_041464427
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Position
5:10828689..10862266
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AA seq
860 aa
AA seq
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MSNMKTMNPELKQFLRRNKVPDVYEALLTGLAVVCPDDPHQYLIENLSELLRQREEDVHG
LESLKWDSLVPDELKPKKKIFGAAYLDNIYLLDEENLHPWEWMPHPELYQKAYQCYNNRL
VTMTFNAWFKYHLRKKAKREWLARKMKEAADYYFLRKQRVHFKIWSDWHHFRMQRQEKAF
NIIQHAYNVSLSRLVFEAWHNVMQESRRTKEYFERLERGELDGEEDTLGPRGEARDDISL
LPRRVAIKIFGYLDLVDISRCSQVCRSWKMITSNTSLWSWVDLSKTKNIVTDNVVTSLLQ
HYRPYVLHLNIKGCTMLTKPSFKAIGQCRNLQDLNLSECPGLNDDTMKYVAEGCSVLLYL
NLSFTNITDATLRLLARCCSNLQYLSLAYCKRYSDKGLQYLGTGKGGRRLVYLDMSGCPQ
VTVNGYKNISGGCPKLQHLIINDCFTLRDDMIIALAGNCPNIRSVSFLYTPNITDGALKA
LAAHRKLQQIRIEGNCKITDASFKQLGKYCADLRHIYVSDCPRITDAALKSLATCRNINV
LNVADCIRISDNGVRNLVEGPSGPKLREMNLTNCVRVTDVSIMKITQKCYSLVYGSFCFS
EHITDAGAEMLGNMPALSSLDISGCNITDTGLGALGNCYHLRDVVLSECHQITDLGIQKF
AQQCRDLDRLDISHCLQLTDQAIKNLAFCCRKLSFLNIAGCSQLSDMSIRYISGVCHYLQ
SLDFSGCIKVSDDSMRFLRKGLKRLRSLIMLYCNLITKPTINKLSAKIDKVVWSDDPIPN
HFGPGFDYLNALSLCKAAMEKEKEENGDKDERDKEEVEEKDGEDKTLVEPKSSETLDSSS
SHEMNRATVLLAQSDITPES
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacatgaagacaatgaaccctgagctgaagcagttcttgaggaggaacaaggtg
cctgatgtctatgaggctctcttaactggtctagctgtggtatgtccagatgatccacat
caatacctgattgaaaatctttccgaactgcttagacagcgagaagaagatgtccacgga
ctggaatctctgaagtgggactcccttgtgcctgatgaattgaagccaaagaagaaaata
tttggagcagcttaccttgataatatatatctactggatgaagagaacctccatccgtgg
gaatggatgccacaccctgagttatatcagaaggcctaccagtgttataacaatagattg
gtcaccatgacattcaacgcctggttcaagtatcacctccgaaagaaggcaaagcgtgaa
tggctggctcggaagatgaaggaggctgctgattactatttcttgagaaagcagcgggtt
cacttcaagatctggtctgactggcatcactttagaatgcagagacaagagaaggccttc
aatatcatccagcatgcgtacaatgtttctttgtctcgacttgtgtttgaagcctggcac
aatgtcatgcaggaatccagacggactaaagaatattttgagaggttagagaggggtgaa
ttggatggagaggaggacacactgggtcctagaggagaagctagagatgacatctcatta
ttgccaagaagagtagccatcaagatctttggctaccttgatcttgttgacatcagtaga
tgttctcaggtttgtcgttcgtggaagatgatcacaagtaatacctctctatggagttgg
gtggacttgtcaaagacaaagaacattgtgactgacaatgtggtgacaagtctccttcag
cattacagaccctatgttcttcatctcaacatcaaaggatgcaccatgctcaccaaacca
agcttcaaagccatcggtcaatgtcgtaacttgcaggatctaaacttatccgaatgtcca
ggactgaatgacgataccatgaagtatgtagccgaaggctgttctgtcttactctatctc
aatctctccttcaccaacatcacagatgctacactaagattattagctagatgctgcagc
aatctacagtacctgagccttgcatattgcaaacgatacagtgacaaagggcttcaatat
cttgggactggcaaaggaggaaggagattagtctatctggatatgtcagggtgtcctcag
gtaaccgtgaatggctataagaatatatcaggcgggtgcccgaagctgcagcatcttatt
atcaatgattgctttactctgagagatgacatgatcattgctttggcaggcaactgtcct
aacatccgcagcgtgtccttcctctacacgcccaacatcacagatggagctctgaaagca
ttggctgctcatcgaaaactacaacagattagaattgaagggaactgtaaaataacagat
gcctccttcaagcagcttggtaaatactgtgctgatttgagacacatctacgtgagtgat
tgcccaaggattactgacgctgcgctgaaatctctagctacatgcagaaacatcaatgtc
ctcaatgtggcagattgtatcaggattagcgacaatggtgtgaggaatcttgttgaaggt
ccttctggtcctaaactgagagagatgaacctaacaaactgtgtcagggtcactgatgta
tctatcatgaagatcactcagaaatgctacagcctagtatatggttcattttgctttagt
gagcacatcaccgatgctggggccgagatgttaggaaacatgccggctctctcatctcta
gacatctcagggtgcaatatcacagacacgggtcttggtgcattaggtaactgctatcac
ctgcgtgacgtggtcctatcagagtgccatcagatcacagatctaggcatccagaagttt
gcccagcagtgtagagatctggatcgactggacatctctcactgtctgcagctcactgat
caggccatcaagaatctggcgttttgctgtcgcaagctctcctttctcaacattgcaggc
tgtagtcagttaagtgacatgagtatccggtacatatcgggtgtttgccactacctccag
tctttagatttctctggttgtatcaaagtaagcgatgattcgatgcgtttccttcgcaaa
ggtttaaagagacttcggagccttattatgctgtactgtaatctcatcacaaagccgacc
atcaacaagctgtctgccaagattgacaaggttgtttggagcgacgaccccatccccaat
cactttgggcctggctttgactacctcaacgcactctccctctgcaaagctgccatggag
aaggagaaagaagaaaatggggataaagatgagagagacaaagaagaggtggaagagaaa
gacggtgaagataagactttggtagagcctaaatcaagcgagaccttagatagctcgtct
tcgcatgagatgaacagagcaaccgtcctcctcgcgcaaagtgatattacaccagaaagt
tag
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integrated database retrieval system
