Lytechinus variegatus (green sea urchin): 121415369
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Entry
121415369 CDS
T11173
Name
(RefSeq) sodium channel protein 1 brain-like isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121415369
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121415369
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
121415369
NCBI-ProteinID:
XP_041464486
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Position
5:complement(12703703..12734780)
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AA seq
2029 aa
AA seq
DB search
MGDLAAVITKENINNVNYRRLTAEAIVEGKERYEAKLERQKLIKSGKHPELEDEEEEEME
ENKASGGEYDSDFASGAVVPAKLGPFPKKLLSTPIEELDPARQEDMSFVVVGRKFKSSQI
FRFTTNDALFCLSPLNPIRRLMMKIYTNEFFDLFVILTIIANCVFLMLDTPRPPEVAEPT
YLRIAEYIFTAIYSAEMFVKILARGFALHPHTYMRDAWNWLDFFVIVLAYVTFGLVESGV
DIGNFNFLRTFRVLRALKTISVVPGLKSIINALIRSTKMLGEVMLLTVFALCIISLLALQ
LFMGKLTRKCVADIPPLDFNISHEYFFNFTQDPANWLTWGGDPVICSNMTLGGRDWSLCP
ENYTCLEGIGDNPNDGYTNFDNIGYSMLTCFQLITLDFWENVYNHILKAQGPFSVFFFLT
TTMFGAFYLINLMLAVVSMAYTEEMENQGKEKAKKAKEKKDKVMELDAAKLKKLAAKKKK
KKKKQAELDGQESQQGSQVPMLTNGQENAGYTGEGSTAGKSDTAKLQDDSISDVGSKASE
KFALKALLSTYTRPNGEGAIDADQGTEMYDGMTDINDSVTENIDSVSGAGSKLDSESHAK
QSTAEGDGEDDEAPIPFNEDDPDNQMDHPCCDYKCCCGCCRRNFICTVPHYRRWRKVQYV
ASWVVLDPLMDLFITLCILGNTAFLMMDHEEIDNNLAYISEEGNKVFTYIFTIECALKLI
ALDKKFFKNPWNVFDLFVVCVSLLEFGLANVEGLSVLRSFRLLRVLKLAQSWTTMRTLLS
IIASAISVIGNVMIVLLIVMFIFAVIGMQILGGSYTPENFDVATLEEVPPWHFRDFHHSI
MLIFRILCGEWIEPLYDCMNVANKPFCIILFIGTLIVGNIMMLNLFLALLLNSFASDSLQ
NKKEAEESKLIIAFRKIGRFLKCLVRPCLCCKKYRNKNKIGDSTENLKVLANGTTKNGIL
PIENGHGGKATIHEFIVVEDVGKDEDKISTIDIDNSSQTGVIRRRNQLTTNGFHLHPSLA
ASNGNLPHMYTNGGSHHGSAVSLRSLPNRPHVAFVTPAPVPAILPPPRVPPSLRLDPPDA
HENDSLSNDAGDCPLVVSTNAETGEIEPPRSVAPTPIPGRSVSHASLASIASRRDTAVVV
NTTATIEEPILEDPVKDCLPGVCTRFYAKKCSCIPCCLDPNENDWAYRFRRYREIMFTVC
EHKVFETFIIIVIFGSSFTLIFEDIYLDQHPRRQEILKVLNYVFFGIFVVEMLIKWSGYG
FVKYFTSFWCWLDFAIVLVGLLSILGDVIGLTNFAAFRALRTLRALRPLRAISRWEGMKI
VVNAVVHAIPSIANVLLVCAMIWLIFSIMGVLFFKGLFDRCVDEDGERLLQSIVNNKSEC
LAKNYSWETPPINFNNVGLGYVALFQVTTFEGWMEAMSAAVDSRGKREDDLQPMKDNRFY
YYIYFVILIVFGSFFLLNLFIGVIIDNFNTLKRKYEGDSSMDMFLTTSQKQYYQTMRRMG
VKKPTKQIKQPTAGNKIQNFFYRLTTSNKFELVIVFVIVLNMITMMIDHYGMSKELTDIL
AQFNIVFTAIFVCEAILKLIGYSWYYFKIPWNVFDFIVVVFSVLGIVLDDVLSSVFINPT
LLRVLRLFRIGRVLRLVKQAKGIRKLLFALVISLPALLNIGILLILVIFVFSIIGMSQFG
HVKLDGALDKTTNFQTWVNSALLLFRLSTSAGWNDVLDPLMVQEPNCNSTYGGLPNGDCG
GFYVPIFFSTVYLVITFLVVINTYIAVILENFSQAHAQEEVGITEDDFGMFYQIWEKYDP
SASQFIKYEQLSEFCDALEAPLRLARPNRIKIAALDMPIYDGFRLHCLDVLFSLTKRVLA
DVEESDDFNELQKQMAEKFAESFPDREQNQPTTTTMKINKMSQAAKIVQRAYRFFRLRRE
ISKAASANRASQASNSNSRKNSVSQEAGKLNLDVSHGSSLGPAMELPGQLGLSRSATPMI
PEETLDNPSSHNKAEKYQLDDQGSEIQTIDASVDIVGSQGTKYETTTQV
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccttgcggctgtgatcacgaaagaaaacatcaacaacgtcaactatcggcgg
ttgactgcggaggcgatcgtcgaaggaaaggagagatatgaagccaagctggaacgccaa
aaactcattaaatcgggcaagcacccggagctcgaagatgaagaggaggaggagatggag
gaaaacaaggccagcggcggcgagtacgattccgacttcgcctccggagccgtagttccc
gccaagctcggccccttccctaagaaacttttgagtactcctattgaagaattagatcct
gccaggcaagaggatatgtcatttgtggtcgtcggcagaaaattcaaatcatctcagatc
ttcaggttcacaacgaacgatgcattgttttgtctatcaccgctcaatcccatacggcga
ctgatgatgaagatatataccaacgagttcttcgatttgtttgtgatcctaaccatcatt
gccaactgtgtctttcttatgctggatactcccagaccacctgaagttgcagagccaaca
tacctcagaatagctgagtatatcttcactgcaatctactctgcggaaatgtttgttaaa
atcttggcaagagggttcgccctccatccgcacacgtatatgagagatgcatggaattgg
ttagatttcttcgtcattgtattagcgtatgtaacgttcgggttagtcgaatcgggcgtt
gacatcggtaacttcaatttcctacggacattcagggttctccgagccttgaaaacgatc
tccgtcgtacctggcctgaagagcatcatcaacgctctcattcgatcgaccaagatgtta
ggggaggtgatgctcctcaccgtgttcgctctctgtatcatctcccttcttgctcttcag
ttgttcatgggtaaactaacaaggaaatgtgtagctgatatcccgccattggacttcaac
atctcccatgaatatttcttcaacttcacacaagatccagcaaattggttaacttggggc
ggcgaccctgtcatctgttctaatatgacgctaggaggacgagattggagtttatgtccg
gaaaactatacatgtttagaaggaattggagacaatccaaacgacgggtataccaatttt
gataacattggttactccatgttaacatgcttccagctaatcacattggacttctgggaa
aacgtctataatcatattttaaaggcgcaaggtccgttctcggttttcttcttccttaca
actaccatgtttggcgcgttttatctcatcaatctcatgcttgccgtcgtctccatggct
tatacagaggaaatggagaaccaagggaaggagaaggccaaaaaggcgaaggagaagaaa
gacaaagtgatggagttggacgcagcaaaactgaaaaagctagccgcaaagaagaaaaag
aaaaagaagaaacaagcagaactggacgggcaggagagtcagcaaggaagtcaggtacca
atgctgaccaacggtcaagagaacgccgggtatacaggggaagggtctacggctggaaag
tcagataccgctaaactacaagatgattctataagtgacgtcgggtcaaaggcatcggaa
aaatttgccttaaaagctctcctttcaacatacactagaccaaacggagagggcgctatc
gatgctgaccaagggacagaaatgtacgatgggatgacagacataaacgattccgtgacg
gaaaatatagacagtgtgtcaggggcaggaagcaagctggactctgagagtcatgccaag
caatcaaccgctgaaggtgatggtgaagacgatgaagcgccaatcccattcaacgaagat
gaccccgataaccaaatggaccatccatgctgtgattacaaatgctgctgcgggtgttgc
cggcgaaatttcatctgcaccgttcctcactatcgccgttggcggaaggtgcagtacgtg
gccagttgggtggtcctcgatcctctgatggacctcttcatcaccctttgcatcctaggt
aataccgccttcctgatgatggaccatgaagagatcgataacaacctcgcttacatctca
gaagagggtaacaaggtcttcacttacatattcactatcgagtgcgcactgaaactgata
gctctggataagaagttcttcaagaatccatggaatgtttttgacctatttgtcgtctgt
gtgagtcttcttgaatttggtctggctaatgtcgaaggtctttccgttctaaggagtttt
cgattgctgcgagttctcaagctcgctcaatcgtggacaacaatgcggaccctcctatcc
atcatcgcgtcggcaatctctgtcatcggtaacgtgatgatcgtccttctgattgtcatg
ttcatcttcgccgtcattggaatgcagatccttggtggcagctacacgccggagaacttc
gatgtggccaccttagaggaagtgcctccatggcacttccgggacttccatcattccatc
atgctgatcttcagaatcctatgtggagagtggatcgagcccctgtatgactgcatgaac
gtggccaacaaacccttttgcatcatcctgtttatcgggacccttatcgtagggaacatc
atgatgttgaatctcttcttggccttgttgctcaactcttttgcctcggactcccttcaa
aacaagaaagaggccgaagaatccaaattgattatagccttccgaaagataggccgcttc
ttgaagtgcttagtgcggccatgcctttgctgtaagaaatacagaaacaaaaacaagatc
ggggacagcacggagaacctgaaggtccttgctaatggaacgacgaagaacggaattctc
ccgatcgagaatggccatggtggaaaggccacaatccacgagttcatcgtggtcgaggat
gtgggtaaagacgaagataagatttcaaccatcgacatagacaacagctcgcaaacaggt
gttatcagacgcagaaatcaactaacaacgaacgggttccacctccatccttccttagct
gcatcgaatggaaacctaccccacatgtataccaatggaggcagtcatcacggcagtgca
gtcagtctcagatcgcttccgaatcgtccacacgtggcatttgtcacacccgcccctgtc
cctgccatcctgcctccaccaagagtacctccttctctccgccttgaccccccggacgct
cacgagaacgactccttgtcgaacgacgctggcgactgcccactcgttgtcagtaccaac
gctgagacgggagagatcgaacctccacgctcagtggctccaacaccaattcccggtcga
tctgtcagtcatgcaagtctcgcgagcatcgcgagcaggagagatactgcggtggttgtc
aacacaactgccactatcgaggaacctatcctagaggaccccgtcaaagactgcctgcca
ggggtgtgcacgagattctacgccaagaaatgttcgtgcatcccatgttgtcttgatcct
aacgagaacgactgggcataccggtttagacggtatcgggaaattatgttcacggtttgc
gagcacaaagtctttgaaacttttatcatcattgtcatctttggaagcagtttcaccttg
atttttgaagacatctacctagatcagcatccaagacgtcaggagatccttaaggtcctc
aactatgtcttctttggcatatttgttgttgaaatgttgatcaaatggagtggctacggg
ttcgtcaaatacttcacaagtttctggtgctggctagactttgctattgttcttgtcggt
ctacttagcatcttgggtgacgttattgggctaacaaactttgctgcatttagggctctt
aggacccttcgagcgctcaggcctctaagggccatctcccgatgggaaggcatgaagatt
gtggtcaatgctgtagtccatgccatcccgtcgatagccaacgtcctgctcgtgtgtgcc
atgatttggctcatcttctccatcatgggtgtcctattcttcaaggggctctttgatcgt
tgcgttgatgaggatggcgagcgattgctccaatccatcgtcaacaacaaatcagagtgc
ctggccaagaattactcgtgggagacaccgcctatcaacttcaataacgttgggttaggc
tacgtggctctctttcaagtgacaacgttcgaaggctggatggaggctatgtctgctgct
gtagattcaaggggaaaacgtgaggatgatcttcagccaatgaaggataaccggttctat
tactacatctactttgtcattctcattgtcttcggatcattctttcttctcaatctgttc
atcggagtcatcatcgataatttcaacaccctcaaacgcaagtacgaaggagatagttca
atggatatgttcctaaccacaagtcagaagcagtactaccagaccatgagacgaatggga
gtcaagaaacctaccaaacagattaaacaaccaacggcaggaaacaagatccagaatttc
ttctaccgcttgacaacgagcaacaaattcgagctcgtcatcgttttcgtcatcgttctg
aacatgatcacgatgatgatcgaccattacgggatgtctaaagaactcaccgatattctg
gcacagttcaacatcgtgttcactgcgatcttcgtctgcgaggcaatcctcaaactaatc
ggctacagctggtactactttaagattccttggaatgtctttgacttcattgtggtggtc
ttctcggtgcttggtatcgtgttagacgatgtgttatccagtgtattcatcaaccctaca
ctgctgagagtgttgaggttatttaggatcggtcgcgtactccgccttgtgaagcaggcc
aaaggcattcggaagcttctcttcgcgctggtcatttctttgccagcccttctcaacatc
ggaattcttcttattctcgtcatctttgtcttctcaatcatcggcatgtcacagttcggg
catgtcaagctcgacggagctctggacaaaaccacgaacttccagacttgggtaaacagt
gcgctgttgttattccgcctgtccacctctgccgggtggaacgacgtcttagacccgctg
atggttcaggagccaaattgtaacagtacatacggagggctcccgaatggagactgtggt
ggattctatgtaccaatattcttctccacagtataccttgttattacattcctagtggtg
atcaacacgtacattgcagtgattctggaaaatttcagtcaagcccacgcacaagaggaa
gtgggaattactgaagatgattttggaatgttctatcaaatttgggagaaatacgatcct
tccgcttcgcagtttattaaatatgaacaactgagtgaattttgtgacgctttagaggca
ccgttacgcctcgccagaccaaatcgaataaagattgcagcgttagatatgccgatctac
gatggatttagattacattgcctggatgttctgttttcgttaacgaaacgagttttagca
gacgtggaggagtcggatgatttcaatgaactccagaaacaaatggcggagaagttcgct
gagagcttccccgaccgcgagcaaaatcaaccgacaacaacgacaatgaaaattaataag
atgagccaagcagcaaagatcgttcagcgggcttataggttcttcaggttgaggcgagag
atcagcaaagcagcttctgctaatcgagcctctcaggccagcaacagcaactcgcggaag
aactccgtgtcgcaagaagcaggaaaacttaacctggatgtgagccacggaagctcgcta
ggacccgctatggaacttcccggacagctgggtctgtcgagaagtgccactcctatgatt
ccagaggaaaccctagacaatccttcttctcataataaagcagagaaatatcagttggat
gatcaagggagtgagatccagacaatagatgcgtccgtggatatagtggggagtcaggga
acaaaatatgagactacaacacaagtatga
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integrated database retrieval system
