Lytechinus variegatus (green sea urchin): 121415483
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Entry
121415483 CDS
T11173
Name
(RefSeq) semaphorin-1A-like
KO
K06842
semaphorin 6
Organism
lvg Lytechinus variegatus (green sea urchin)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Motif
Other DBs
NCBI-GeneID:
121415483
NCBI-ProteinID:
XP_041464618
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Position
5:46216803..46250176
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AA seq
724 aa
AA seq
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MESCDRASHWRDVIVDAERELTITLDVFVKLRASYLEILEDIHHTPMELLLVCTLILSCL
IIQSHSSTPIIATLPPEVAGVEKVYSKPGTMGFRILHRESDSALIGGREMLLTLNHNDPN
SLHKSVEEFKTCDNGDAFIQCRTRTTFKKDRDCFNFIRIAEVISNNKLLVCGTNALNPRC
YNCNLTRNSAGMQEVSCPGPRGDGTCQFSRSQPLGTVDGTNIAPKHWELNATSQYSDGQL
FLGVSQSHGKSETTISRVDVYPDSGFTNRLDTTSYFSRSVNEADFVGKPLVIGDRVYYFY
RELAVEHVNQGKLVYSRVARVCKGDNGIDNFWSSFQKARLSCSIPGEFPLYFNDLQDIFV
EERGSDHYIHAAFAGVPNGPQSSAVCVFLLSEINEIFDTSNFKGPASSDSIWLSRPSREI
PVPRPGLDCNNPTQDIRYIRQYPLMQDDASSIPLFIVDYARFTSIVMDSLPAGNIYYIGT
ESGSVLKAYYNGTEFKVYEVTVTDNKQPVVGLQLAGESTNRHIIVVSDNAVYRVPLHNCA
TSCERRCSELMYGYCQWEGGCCKSYGETTCSENPVDVYVTIEPSQSMTVCENEIIQLVCH
AQTAPFCQPITLDWTMAGGQPIDDMGHLISLDQLYDYPLHKLSALTVQSAITGNTTTMEC
TARTTIGGQAYSVTKATTINIQNCITQGSLERRYNLHQQLKQENTMSKSCDAEIFDCANC
ASFP
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctgtgatcgagcgagccattggcgtgacgtcattgttgatgcggaacgggaa
ctgacgatcacacttgatgtgtttgtaaaactaagagcatcatacttagagattttggaa
gatatacatcacaccccaatggagctgctgcttgtgtgtactttgattttatcatgtttg
ataattcaaagtcattccagtacacctatcattgctactctacctcctgaagttgccgga
gtggagaaagtttattctaaacctggtaccatgggttttcgtattctacatcgtgaatca
gacagcgccctcatcggaggaagagaaatgcttctcacattaaatcataatgatccaaac
agtcttcataaaagtgttgaagaattcaaaacttgtgacaatggcgatgcatttattcag
tgtcgaactcgtacaacatttaaaaaggatagagactgttttaacttcataaggatagca
gaggtaatctccaacaacaagctactggtgtgtggaactaacgccctcaatccaagatgt
tataactgtaatctcacaagaaacagtgctggtatgcaagaagtgagttgtcccggtccc
agaggtgacgggacatgtcaattcagtagatcacaaccccttgggacagtggatggtacc
aatattgcaccaaaacactgggaacttaatgctacttcacagtactcagatggtcagtta
ttcctaggagtttcccaaagtcatggtaaatcagagactaccatctctcgggttgatgtg
tatccagatagtggattcaccaaccgacttgatactacatcttacttctcaagatcagtc
aatgaggccgattttgttggtaagccattggtaattggtgatcgagtatactacttctac
cgagagctggctgttgaacatgttaatcaaggcaaactagtatacagcagggtggcaaga
gtgtgtaagggagataatggaatcgacaacttttggtccagttttcagaaagcaagatta
agctgttcgattccaggggaatttcctttatatttcaatgatttacaggatatttttgtt
gaggaaaggggatcagatcactacattcatgcagcatttgctggtgtgcctaatggccca
cagagctcagcagtatgtgtgtttctcctgtcagaaataaatgaaatctttgatacaagt
aatttcaaaggaccagcctcttcagatagtatctggctttctagaccaagcagagaaatt
cctgttccaagaccaggtctagattgcaataatccaactcaagacattagatacatcaga
caatatccattgatgcaggatgatgcttctagtattcctttattcatagttgattacgct
cggtttacttccatcgttatggattcactacctgctggaaacatatactatattggaaca
gaatctggctctgtactgaaagcgtattataatggcactgaattcaaagtttatgaagta
actgtgacggataacaagcaacctgtggtgggtctacagctggctggtgaaagcacaaac
cgtcacatcatagttgtatctgataatgctgtatacagggtaccattacataactgtgct
actagctgtgaaaggagatgttctgaattgatgtatggatactgtcaatgggaagggggc
tgctgtaaaagctatggtgaaacgacatgtagcgagaacccggttgatgtttatgtaacc
atagagccaagtcagtcaatgacagtatgtgagaatgagataatccagctcgtctgccac
gcccaaactgcaccattctgtcaaccaattactctcgactggaccatggccgggggtcaa
cccatcgatgacatgggtcatcttattagtttagatcagctttatgactacccactccac
aagctgagtgctctgaccgtccagtcggctatcactgggaatacaacgaccatggaatgc
acagctcggaccactattggtggacaggcttatagcgtcacaaaggcaaccactattaac
attcagaattgcatcacccaaggatcactagagagaagatacaaccttcatcaacaactg
aaacaagagaatactatgagcaagagttgtgatgctgagatatttgactgtgctaactgt
gccagcttcccatga
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