Lytechinus variegatus (green sea urchin): 121415785
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Entry
121415785 CDS
T11173
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
lvg04137
Mitophagy - animal
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121415785
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121415785
04137 Mitophagy - animal
121415785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121415785
Ubiquitin system [BR:
lvg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121415785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
121415785
NCBI-ProteinID:
XP_041465045
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All DBs
Position
5:complement(24342259..24347654)
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AA seq
609 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaagaccctcacaggcaagaccatcactcttgaggttgagccaagt
gacaccatcgagaacgtaaaggcaaagattcaggacaaggaaggcatcccccctgatcag
cagcgtctcatcttcgctggcaagcaactcgaggacggccgcactctatcagactacaac
atccagaaggagtcaactctccatcttgttctcagactccgtggaggtatgcagatcttc
gtcaagaccctcactggcaagaccatcactcttgaggttgagccaagcgacaccatcgag
aatgtcaaagcaaagattcaggacaaagaaggcattccccctgatcagcagcgtctcatc
ttcgctggcaagcaactcgaggatggccgtactctatcagactacaacatccagaaggag
tcaactctccatctcgttctcaggctccgtggaggtatgcagatcttcgtcaagaccctt
actggcaagaccatcactcttgaggttgagccaagtgacaccattgagaatgtaaaggca
aagattcaggacaaggaaggcattccccccgatcagcagcgtctcatcttcgctggcaag
caactcgaggacggccgcactctatcagactacaacatccagaaggaatctactctccat
cttgttctcaggcttcgtggaggtatgcagatcttcgtcaagaccctcacaggcaagacc
attactcttgaggttgaaccaagcgacaccatcgagaatgtcaaagcaaagattcaggac
aaagaaggcattccccctgatcagcagcgtctcatcttcgctggcaagcaactcgaggac
ggccgcactctatcggactacaacatccagaaggagtcaactctccatcttgttctcagg
ctccgtggaggtatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagccaagcgacaccatcgagaatgtcaaagcaaagattcaggacaaagaaggcatt
ccccctgatcagcagcgtctcatcttcgctggcaagcaactcgaggatggccgcactcta
tcagactacaacatccagaaggagtcgactctccatctcgttctcaggctccgtggaggt
atgcagatcttcgtcaagaccctcactggcaagaccattactcttgaggttgagccaagt
gacaccatcgagaatgtaaaggcaaagattcaggacaaggaaggcattccccccgatcag
cagcgtctcatcttcgctggcaagcaactcgaggacggccgcactctatcagactacaac
atccagaaggagtcgactctccatcttgttctcaggctccgtggaggtatgcagatcttc
gtcaagacccttactggcaagaccatcactctcgaggttgagccaagtgacaccatcgag
aatgtaaaggcaaagattcaggacaaagaaggcattccccctgatcagcagcgtctcatc
ttcgctggcaagcaactcgaggacggccgcactctatcagactacaacatccagaaggag
tcaactctccatcttgttctcaggctccgtggaggtatgcagatcttcgtcaagaccctt
actggcaagaccatcactcttgaggttgagccaagcgacaccatcgagaatgtcaaagca
aagattcaggacaaagaaggcattccccctgatcagcagcgtctcatcttcgctggcaag
caactcgaggacggccgcaccctttcagactacaacattcagaaggagtcgactctccat
cttgttctcaggctccgtggtgggcaataa
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integrated database retrieval system
