Lytechinus variegatus (green sea urchin): 121415890
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Entry
121415890 CDS
T11173
Name
(RefSeq) STAGA complex 65 subunit gamma-like isoform X1
KO
K11316
STAGA complex 65 subunit gamma
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121415890
03036 Chromosome and associated proteins [BR:
lvg03036
]
121415890
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121415890
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
121415890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
Bromo_TP_like
Motif
Other DBs
NCBI-GeneID:
121415890
NCBI-ProteinID:
XP_041465202
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All DBs
Position
5:29356126..29377889
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AA seq
459 aa
AA seq
DB search
MWIEGSTRHQLVIFHLTQALGEDLAMSGHWGEMSGSIVSPLTSSMVDMETLAMKSQSVQV
KVPHLHQPSAQQKPQIHQLQSELCRPDVTSLHSIELLKHCRQIRTRMLTHHHHQESSKGE
ERFSNTRLPPLPPQPQIQTTDKPSIPVITGIKARPECPRLKLPDGSVEIDAGIARQLTCR
AVATICSHSGYDSSQESSLETLTDVLQEFLCNTCKLLRVAVDREALTGHTGFQDTLTQVF
HEIGVGSTQTLISFWKTRIRDYHDRILKQTEDIRGKYEDMKNPNYQPQDDKSPRVKEEPL
SDISFHDSQSQPHDDSHENNSETSSSETPSNQPLSFHSLSGMDLDDSSGAVTVVERGGER
REGEEEEVDESSSEWYQGVKEEDNGEDASSSSAGIAGVKRELMSGEDENAQDVKIEEAII
GESPLISHLQTSHALDVDNTSPVEKKIHLNMPPRKKKKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcgaggggtctacgcggcatcagttagttattttccatttgactcaagctttg
ggtgaagatttagcgatgagcggacattggggtgagatgagtgggtcaattgtttcacct
ttgacttcctctatggttgacatggagaccctggccatgaagtcacagagtgtccaggtc
aaagtgcctcatcttcatcaaccttctgctcaacagaagccacagattcatcaattgcag
tctgagttatgcagacctgatgtgaccagtctgcactcaatagaattactcaaacactgc
aggcaaatcagaacaagaatgctcacgcaccaccatcatcaagaatcctcgaaaggagaa
gagagattcagcaataccaggctaccacccctaccgccccagcctcagatacaaaccact
gataagccatctatccccgtcatcactggtatcaaagcaagaccagagtgtccaagatta
aaactgcctgatggaagtgtcgagattgacgctgggatagccagacaactcacctgtcga
gcagtcgccaccatctgttcacatagtggatatgattcaagtcaggaatcttcattggaa
acattaacagatgttcttcaggagttcttatgtaacacttgtaaactactcagagtagcc
gtagacagggaggctcttactggccacacgggattccaagacaccctcacccaagttttc
catgagattggtgtcgggagcactcagacccttatcagtttctggaagaccaggatacga
gactatcatgaccgcatcctgaaacagaccgaggacattagagggaaatacgaggacatg
aagaatccaaattaccagccacaagacgacaagtcaccaagggtgaaagaagagcctctg
tctgatatttccttccatgattctcagtcacaaccccatgacgatagccacgagaacaat
agtgaaacttcctcatctgagacaccatccaatcagccactctctttccacagcctcagt
gggatggacttggatgactccagtggtgcagtgacggtggttgaaaggggaggagagaga
agagaaggagaggaggaggaggtggatgagagcagcagtgaatggtaccaaggggtaaag
gaagaagataacggggaagatgcatcaagctcgtcggcggggatagctggtgtgaagaga
gagctgatgagtggggaggatgagaatgcacaggacgtgaagattgaagaagcaataatt
ggggaatcccctcttatatcccacttgcaaacaagccacgcccttgatgttgataacacc
tcgcccgtggaaaagaagatacacttgaatatgccacctagaaagaagaagaagaagtga
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