Lytechinus variegatus (green sea urchin): 121415894
Help
Entry
121415894 CDS
T11173
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
lvg04137
Mitophagy - animal
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121415894
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121415894
04137 Mitophagy - animal
121415894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121415894
Ubiquitin system [BR:
lvg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121415894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
121415894
NCBI-ProteinID:
XP_041465207
LinkDB
All DBs
Position
5:complement(29513167..29518603)
Genome browser
AA seq
761 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIXPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaagaccctcacaggcaagaccatcactcttgaggttgagccaagt
gacaccatcgagaacgtaaaggcaaagattcaggacaaggaaggcatcccccctgatcag
cagcgtctcatcttcgctggcaagcaactcgaggacggccgcactctatcagactacaac
atccagaaggagtcaactctccatcttgttctcaggctccgtggaggtatgcagatcttc
gtcaagaccctcactggcaagaccatcactcttgaggttgagccaagtgacaccatcgag
aatgtaaaggcaaagattcaggacaaggaaggcattccccccgatcagcagcgtctcatc
ttcgctggcaagcaactcgaggacggccgcactctatcagactacaacatccagaaggaa
tctactctccatctcgttctcaggctccgtggaggtatgcagatcttcgttaagaccctt
actggcaagaccatcactcttgaggttgagccaagcgacaccatcgagaatgtcaaagca
aagattcaggacaaagaaggcattccccctgatcagcagcgtctcatcttcgctggcaag
caactcgaggacggccgcactctatcagactacaacatccagaaggagtcaactctccat
cttgttctcaggctccgtggaggtatgcagatcttcgtcaagaccctcactggcaagacc
atcactcttgaggttgagccaagcgacaccatcgagaatgtcaaagcaaagattcaggac
aaagaaggcattccccctgatcagcagcgtctcatcttcgctggcaagcaactcgaggac
ggccgcactctatcagactacaacatccagaaggagtcaactctccatcttgttctcagg
ctccgtggaggtatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagccaagcgacaccatcgagaatgtcaaagcaaagattcaggacaaagaaggcatt
ccccctgatcagcagcgtctcatcttcgctggcaagcaactcgaggacggccgcactcta
tcagactacaacatccagaaggagtcaactctccatcttgttctcaggctccgtggaggt
atgcagatcttcgtcaagaccctcactggcaagaccatcactcttgaggttgagccaagc
gacaccatcgagaatgtcaaagcaaagattcaggacaaagaaggcattccccctgatcag
cagcgtctcatcttcgctggcaagcaactcgaggacggccgcactctatcagactacaac
atccagaaggagtcaactctccatctcgttctcaggctccgtggaggtatgcagatcttc
gtcaagacccttactggcaagaccatcactcttgaggttgagccaagtgacaccatcgag
aatgtaaaggcaaagattcaggacaaggaaggcattccccccgatcagcagcgtctcatc
ttcgctggcaagcaactcgaggacggccgcactctatcagactacaacatccagaaggag
tcaactctccatctcgttctcaggctccgtggaggtatgcagatcttcgtcaagaccctt
actggcaagaccatcactcttgaggttgagccaagtgacaccatcgagaatgtcaaagca
aagattcaggacaaagaaggcattncccctgatcagcagcgtctcatcttcgctggcaag
caacttgaggatggccgcactctatcagactacaacatccagaaggagtcaactctccat
cttgttctcaggctccgtggaggtatgcagatcttcgtcaagaccctcactggcaagacc
atcactctcgaggttgagccaagtgacaccatcgagaatgtaaaggcaaagattcaggac
aaggaaggcattccccctgatcagcagcgtctcatcttcgctggcaagcaactggaagac
ggccgcactctatcagactacaacatccagaaggagtcaactctccatcttgttctcagg
ctccgtggaggtatgcagatcttcgtcaagaccctcacaggcaagaccatcactcttgag
gttgagccaagcgacaccatcgagaatgtcaaagcaaagattcaggacaaagaaggcatt
ccccctgatcagcagcgtctcatcttcgctggcaagcaactcgaggacggccgcactctt
tcagactacaacattcagaaggagtcgactctccatcttgttctcaggctccgtggtggg
caataa
DBGET
integrated database retrieval system
