Lytechinus variegatus (green sea urchin): 121416012
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Entry
121416012 CDS
T11173
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121416012
Ion channels [BR:
lvg04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121416012
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
GBD_Hemicentin
vWA-TerF-like
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
121416012
NCBI-ProteinID:
XP_041465374
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All DBs
Position
5:complement(35147944..35167886)
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AA seq
1386 aa
AA seq
DB search
MSYKILISVTLLSEVFLLGVVAEQKNIITLNDGAYSNLLIAIDTSLPEDPNIIENIKTMF
TSASQRLYLASKQQVYWKHIKILVPNTWSVQSRYQFARTETLESANIVVHDFPDDEPFVD
NFAGCGKEGYLMHITPEYILQEMYRENKYGPTDSVLVRNWGYLRWGLFKEHYDPDDVREV
GAPAYDIPGGGTEGTRCSLKIKGEVLHADGRTCQKTPNSDYDPSCRFVPNTAGQTATASL
LFGTRNAPVHSIEEFCSDDISDPHSLHNPLAPNLMNNRCNGESAWKVMERTGDFKAGIQP
VSNTTPSFELLQLSTVRSVVLVLDISGSMGGNRFDRMIQSSTDYIMNVIPEGSKLGIVVF
GSTSQIRASLTDVTDTTSRQYLASALPPSAGGSTCIGCGILSGIQVLGSYAQGGYILLLS
DGGENVSPYIRDTYDEIENSGVIMDTITISNSADQQLEDLSNMTSGISTFCSDSGTGTCL
IQAFQSTITERPDVGMETVPIQIYSSEIVIDSSPGFEIVPIIIDGALGNNTVITVIWTTS
SSISVEVTGPSGTLIDENDPRYHIDLSTKIVTVNLPFALPGRWNVTIYSTQGITEHASVA
VTSKPSQEEYQPVTVTVLLGSREVDLSQTPALAIYARVQQDHHPVLNADVTAIISDANAA
TTTMSLLDGGSGSDLFKDDGTYSGFFLGFASNGRYNVKVNVIGYEDVIKVSKNRRRRRST
TVEVGTIEEPSFMRTASGGVFKVQSYTANLLDTIAPSRIQDLIYESFSYDNSTVTLDWTA
VGDDMDHGTAYSYELRYSTNFSEVRDDFNKSHLVSQEQVLYGNLSHVNASGTTESVTITL
PQKGEDIVYYFGIRAWDEAGNGGDLSNIASLSIRFIPMALPTAVMTTDMTEIITSVDKTE
SIAPGTSETSSENILTSSDTLITTSDNETPTSGLTTEFIHTFPGSQSTPRAETTDVMTEI
ITTLDKTESIAPGTIETSSEDIPTSSETLTIENTTPAIETPTSGLTTEFIHTFPGSPSTP
RAETTDVITEIITTLDKTESIAPGTIETSSEDIPTSSDTLNTTSDIETTTSGLTTELIHT
IPGSQSTPGKETTFDITTGTSTTTTNELFSQTSSIPGFSMSSTTDQSTQFTTKSLEKTIY
PRVSTSSNQSIEPKTSSTTDTTDLFSTHKPYTSTPFTTESRPPKLTTSTSPSGIYVTTHQ
ENPETTVSKQPEPLERTTHQEIPETTVSKQPEPLERTTHQEIPETTVSKQPEPLERTTHQ
EIPETTVSKEPEPWERTTHQDIPETTVSKQIEPWERTTHQEVPESTKATEPTGSEAQAVI
IGLSCALSAVTIIAAVSLVYIYNVKQSLNQVKPITPPQSAWAHQGIADVEMAQKEPSYNH
PTFKTA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaagattttgatttcggtaacgctgctttctgaagtatttcttctaggagtg
gtagcggagcagaaaaatatcatcactttgaacgatggggcctactcaaacctcctcatc
gcaatagatacaagccttcctgaagatcctaacatcatcgaaaacatcaaaacgatgttc
acatcagcatctcagcgtctctacctcgccagcaagcagcaagtctactggaaacacatc
aagattcttgtcccaaacacctggtccgtacagagccgatatcaatttgctcggaccgaa
acgttagagtcggcgaacatcgtagtgcacgactttccagatgatgaaccgtttgtggat
aactttgcaggatgtgggaaagaaggttatctgatgcacattacaccggaatatattctt
caagaaatgtaccgagaaaacaaatatggccctaccgacagtgtcttggttcgaaattgg
ggttatcttcgctggggattattcaaagaacattatgatcctgatgacgtcagagaggtt
ggcgcccctgcctatgatatacccggtggaggtactgaaggaacccgctgttctctcaag
atcaagggagaagttttacacgccgacggtcgtacgtgtcagaaaacacctaacagcgat
tacgacccatcctgtagattcgttccaaatactgcagggcagacagcgaccgcttcgttg
ctatttggaaccaggaatgctcccgtacattccatagaggaattttgtagcgacgacata
tcagatcctcacagcttacataaccctctagcaccaaacttgatgaacaacagatgcaat
ggggaaagtgcgtggaaggtgatggaacggacaggcgacttcaaagctggcatccaacct
gtctcgaacaccactccttcttttgaacttcttcagctatctactgttaggagtgtagtg
ctagtgcttgatatcagtgggagtatggggggaaaccggtttgaccgtatgattcaatca
tctactgactacatcatgaacgtcattccagaaggtagcaagctgggaatcgtcgtcttc
ggaagtacctcacaaatcagagcaagtctcaccgacgtcacagatacaacgtccaggcaa
tatctagccagtgctttgccaccgtccgcaggaggatcaacgtgtattggatgtgggata
ctgtctggcattcaggtccttgggtcatacgcacaaggaggatacatcttacttcttagt
gatggcggagagaatgtatctccgtacattcgagacacgtatgacgaaatcgagaactct
ggggtcataatggataccatcactataagcaactcggctgaccaacaattggaagatctt
tccaacatgacttctggcatctctaccttctgctccgatagtggaactggaacgtgtctc
attcaggcctttcagagtacgataactgaaagaccagatgtcgggatggagaccgtccct
atacagatctatagctccgagatcgtcattgatagctctcctggtttcgagatcgttccg
ataatcattgacggcgcattgggtaataacacagtgatcactgtgatatggaccacgagc
tcatcgatctcggtcgaagtcactggaccaagcggtactctgattgatgaaaacgaccca
aggtatcatattgatctcagcacaaagattgtgacagttaacctaccattcgccctgccc
ggtaggtggaacgttaccatttacagcactcagggaatcactgagcacgcgagtgtagca
gtaacatctaaaccaagtcaggaggaatatcaaccagttacagtaactgttcttctcgga
tcaagggaggtggatctttctcagactccagcactagcgatctatgctcgggtgcaacag
gatcaccatccagttcttaatgctgacgtcacggctatcatctcagacgccaatgcagca
acaacgaccatgtcattgctagatggtggttcaggttcagatttattcaaggacgatgga
acatattcgggatttttccttggtttcgcttccaacggtagatataacgtcaaggtcaat
gtcatcggctatgaagacgtaattaaagtctcaaaaaatcgaagaagaagacgatcaact
acagttgaagtcgggaccatagaggagccatcttttatgcggacagcatctggaggagtc
tttaaagtccagagctatacagccaaccttttagataccatcgcgccttctcgtattcaa
gacttgatctacgagtccttctcatatgacaatagcacagtaactctggactggacagct
gtaggagatgacatggaccacggaactgcatacagttacgaacttcgctattccaccaac
ttctccgaggtgcgagacgacttcaacaagagccatttggtctctcaagaacaagtgctg
tacggcaatctatcccacgtcaatgcttcaggaacaacggagagtgtcactattaccctt
ccacagaagggagaggacatcgtttattattttggtattcgagcttgggatgaggccggg
aatggaggagacttgtcgaacattgcttcactgtctatccgtttcataccaatggcatta
cctaccgcagtgatgactactgatatgacagagataatcacttctgtagacaagacagaa
tcgattgctccaggaaccagcgaaacctcgtcagaaaacatactaacatcgtcggatact
ttgattaccacgtcagataatgaaacaccaacctcaggtctaacaacagaatttattcat
acatttcctggatcacaaagtacacccagagcagaaacaactgatgtaatgacagagata
attactactcttgacaagacagaatcgattgctccaggaaccatcgaaacttcgtcagaa
gacataccaacatcgtcggaaacattgactattgagaataccacgccagcaattgaaaca
ccaacctcaggtctaacaacagaatttattcatacatttcctggatcaccaagtacaccc
agagcagaaacgactgacgtaataacagagataattactactcttgacaagacagaatcg
attgctccaggaaccatcgaaacttcgtcagaagacataccaacatcgtcggatacattg
aataccacgtcagatattgaaacaacaacctcaggtctaacaacagaacttatccataca
attcctggatcacaaagtacacccggtaaagaaacgacttttgatattactactggtaca
tcgaccacgacaacgaacgagctttttagtcaaacatcaagcataccagggttctcgatg
tcaagcactactgaccaatctacacagttcacgacaaagagcttagagaagacaatttat
ccaagagtttctacatcttcgaaccagtccatagagccaaagacttcaagtactactgac
acgactgatctgttttcaacacacaagccttacacatctactccattcacgactgaatct
agaccaccaaaacttacaaccagtacttcgccatcagggatatatgtaacaacacatcaa
gagaatcctgagaccacagtatccaagcaacctgagcctttggagcgaacaacacatcaa
gagattcctgagaccacagtatccaagcaacctgagcctttggagcgaacaacacatcaa
gagattcctgagaccacagtatccaagcaacctgagcctttggagcgaacaacacatcaa
gagattcctgagaccacagtatccaaggaacctgagccttgggagcgaacaacacatcaa
gatattcctgagaccacagtatccaaacaaattgagccttgggagcgaacaacacatcaa
gaggttcctgaatcaacgaaagccacggaaccaaccggatcagaagcacaggctgtaatc
attggcctgtcttgcgcactaagtgcagttaccatcatagcagcagtcagtttggtgtac
atctacaatgttaagcagagtctcaatcaggtaaagccgattaccccgcctcaatcggcc
tgggcacaccaaggaattgcggatgtagagatggcacaaaaggaacctagctacaatcat
cctactttcaaaacggcttga
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integrated database retrieval system
