Lytechinus variegatus (green sea urchin): 121416074
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Entry
121416074 CDS
T11173
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-10-like
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121416074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121416074
Ion channels [BR:
lvg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121416074
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121416074
NCBI-ProteinID:
XP_041465459
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Position
5:37784021..37790215
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AA seq
529 aa
AA seq
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MKMDVFRSRCVLLISAIIFGFTLKVSDAEMMLTMSNSTGTMRPSFNTETRLVRDLLSQYS
RYVRPVFNESTIIYVYYHMRLSRILQMDERNQILITAMWLEQSWIDEYLTWDPDEYDNIT
AVHIPTTMIWIPDTVLYESADVEKELGNDVMLTNAKIFYNGTVFWQAPAIFKSSCSLSVE
YFPFDQHSCKLKFGPWAYLGNEVIMKKQSDSGDFSQLSPNGQWQLQGMPVVENLIKYGCC
PIPYSDVTYYINLKRKSLFYVFNLLFPSVFMSLVSLLSFYLPPDSGEKVGLNITSLLSLV
FFLLLGAQLLPPTSESISYLGKLFSTIIAIMGIETAISVIILRLYHLHLPYPPPAWARWL
ILDKAAQLLRLNGWRHEYSDDEGSMVEVIDHDAQDYKTSDPFEFDNRKASMETKAIGESL
LQKLDMSPEDVAVPEIKEKHSSEDSDYGSETNDDSMGSSIMRISNYIRRLVNISRKKEAM
SAIQQQWIDLCLILDRVLLILMMTALILGCISILSIMSNPASQEEFEIW
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggatgtttttagatcaaggtgtgttcttttgatatctgcgatcatattcggc
ttcacgttaaaggttagtgacgccgagatgatgttgacgatgtcgaattcgaccgggacg
atgaggccgtctttcaacacggaaacccgtctggtcagagacctcctgtcacaatacagc
cgttacgtgcgtccagtcttcaatgaatccactatcatctatgtatattatcatatgaga
ttgtccagaattcttcaaatggacgaacgaaaccagattttgatcacagcgatgtggctc
gaacagagctggatagatgaatatctaacatgggatcctgatgaatacgacaacataacc
gccgttcatattcctaccacaatgatatggataccggatacagtgctctacgaaagtgcg
gacgtcgaaaaggagcttgggaatgacgtcatgctcaccaatgccaagatcttctacaat
ggaaccgttttctggcaagcccctgctatcttcaagagctcctgtagtctaagcgtcgag
tacttcccctttgatcaacacagttgtaaactcaaatttggcccgtgggcctatctcggc
aacgaggttatcatgaagaaacaatcagactctggtgacttctcacagctgagtccgaac
ggccagtggcaacttcaggggatgcccgttgtagagaatctcatcaagtacggttgttgc
ccgatcccatactcggacgtcacctactatatcaacctgaaacggaagtcactcttttac
gtcttcaaccttctcttcccatcggtcttcatgtctctggtatcgttgttgagtttctac
ctccctccagactcgggagagaaagtgggtctcaacatcaccagcctgctgtctcttgtc
ttctttctcctcctgggagcacagctcctgccgccaacctcggaatcgatttcctacctt
ggtaagctgttttcaaccatcatcgcaataatggggatcgagacggccatctccgtaatc
attctccgtctttaccatctccacttaccctatcctcctcctgcatgggcccggtggctc
atcctcgacaaagccgctcaactccttcggctcaatggttggcgtcacgagtacagcgat
gacgagggttccatggtcgaagtcatcgaccacgacgcacaagactacaagacgagtgac
ccattcgagttcgacaatcgaaaggcatcgatggagaccaaggcgattggagagagcctt
ctgcagaagcttgacatgagccccgaagacgttgccgtgccagaaatcaaggagaagcat
tccagtgaggattccgactatggtagtgagaccaatgacgacagcatggggtcatcgatc
atgcgcattagcaactacattcgcagactggtaaacatttctcggaagaaagaagcaatg
tctgctatccagcagcaatggatagatctttgtctcattcttgatcgggttttactcatt
ctcatgatgacagccctgatccttggatgtatcagtattctttctatcatgtcaaatcct
gcatcccaagaagaattcgaaatttggtga
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