Lytechinus variegatus (green sea urchin): 121416083
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Entry
121416083 CDS
T11173
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121416083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121416083
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121416083
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
121416083
NCBI-ProteinID:
XP_041465473
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Position
5:complement(38103473..38109087)
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AA seq
570 aa
AA seq
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MKVSKKGSNLDKTKICSKPDISYEAKIKIRKIPSQNVVHRLRFREIYRPKYLSHFSLTRS
FHQNVFPNFTIVNVEKPPCFLRKFSPDGRYFIAFSSDQTSLEIYRFEGPAAAGDLLQNLH
SSKPDVADAEAHNVRGQLFERFFVLWHTVNIAPNGEHLNRECSLFTDDGRYVIVGSAVYV
PDEPYPHFYDMYRNNESVSPTHRSPLEDYSLHLIDLQMGVLCDTRTFKCDKIFLSHNQGL
YLYKNILAVLSVQQQTIHIFQVTADGRFLDVRTIGRFCHEDDALAISILRYEMPSSNSSQ
NERPFRDACINSLKHRLLVYLWKRAHREGTPIAMRHFYQHFDIFRWLRMWKMQLLDEVHL
LIKYASEDVVTLRMTDPTSQPSFFVVYNMVTTEVVSVFENTSEELLELLENFCDLFRNAT
LHAHTQLTCSASSNVYARQIQRRFKHTIINAKYGGHMEAVKRLLAQLPISSQSYSSSPYL
DLSLFSYDDKWVSVMERPKACGDYPIRFYARDSGILKFKIHAGLVGRPSPPSARRLVAFT
FHPYEPFAISVQRTNTEYVVNFHVRHQPAD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgtcaaagaaaggatccaaccttgacaagaccaagatttgcagcaaacccgat
ataagctatgaagccaagatcaaaatacgaaagatccccagccaaaatgttgtacatcgg
ttacggttcagagaaatttatcgtccgaaatatttgtcacatttctctctcacaagatca
tttcatcagaatgtctttccaaacttcaccattgttaatgtggagaagccaccttgtttt
ttgcgcaagttctctccggatggacgctatttcatagccttttcctcggatcagacttct
cttgagatatataggtttgaaggaccagctgcggctggtgacctgctgcagaatcttcac
tcgagcaaaccagatgtggcagatgcagaagcacataatgtccgtggtcagctctttgaa
cgattctttgtactgtggcacactgtaaacatagctccaaatggtgaacacctaaacaga
gaatgcagtttgttcaccgatgatggcaggtatgtcattgtaggatcagctgtctatgtc
ccagatgaaccctatcctcacttttatgacatgtatagaaataatgagtctgtatcacca
actcaccgatctcctcttgaagattactcccttcatctgatagacttgcagatgggtgtc
ttatgtgatactcggacattcaagtgtgacaagatcttcctgtcccacaatcaggggctc
tatctctacaaaaacattctagctgttctgtctgtgcagcagcaaaccattcatatcttt
caagtgactgcagatggtaggttcctggatgtaaggactattggaaggttttgtcatgag
gatgatgccttggctatatccatcttgcgatatgaaatgccctcctcaaactctagccaa
aatgaacgacctttccgtgacgcttgcatcaactccttgaagcacaggctgcttgtgtac
ctttggaagcgtgctcacagagaagggacacccattgccatgaggcacttctatcaacac
tttgatatcttcaggtggttacggatgtggaagatgcaattgcttgatgaagtacacctt
ctgattaagtatgccagtgaggatgtggtgacattacggatgactgatccaacttcccaa
ccatctttctttgttgtctacaacatggtcacaactgaagttgtttctgtctttgagaat
acttctgaagagctcctggagttgctggaaaacttttgtgacctcttccgaaatgccaca
cttcatgctcacacccaattgacctgctcagcatcaagcaatgtttatgctagacagata
cagaggagattcaagcacacaatcatcaatgccaaatatggagggcacatggaagctgtc
aaaagacttcttgctcagttgccaatcagttctcagtcctacagtagcagcccgtacttg
gacctgtcccttttcagctatgatgataagtgggtgtcagtgatggagagacctaaagca
tgtggggactaccctatcaggttctatgctagagattcaggcatcttgaagttcaagatc
catgccggcctcgtaggacgtccttcccctccatcagctcgtcgactagtggccttcacc
ttccatccgtatgaacctttcgctatctccgttcagaggacaaacacagagtatgtggtc
aacttccatgtgcgtcaccaaccagcagactga
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