Lytechinus variegatus (green sea urchin): 121416108
Help
Entry
121416108 CDS
T11173
Name
(RefSeq) calcium-activated chloride channel regulator 1-like isoform X1
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121416108
Ion channels [BR:
lvg04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121416108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
GBD_Hemicentin
VWA_CoxE
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
121416108
NCBI-ProteinID:
XP_041465498
LinkDB
All DBs
Position
5:complement(38839277..38865060)
Genome browser
AA seq
1255 aa
AA seq
DB search
MHITPEYILQEMYRENKYGPTDSVLVRNWGYLRWGLFKEHYDPDDVREVGAPAYDIPGGG
TEGTRCSLKIKGEVLHADGRPCQKTPNSDYDPSCRFVPNTAGQTATASLLFGTRNAPVHS
IEEFCSDDISDPHSLHNPLAPNLMNNRCNGESAWKVMERTGDFKAGIHPVLNTTPSFELL
QLSTVRSVVLVLDISGSMGGNRFDRMIQSSTDYIMNVIPEGSKLGIVVFESTSQIRASLT
DVTDTTSRQYLASALPPSAGGSTCIGCGILSGIQVLGSYAQGGYILLLSDGGENISPYIR
DTYDEIENSGVIMDTITISNSADQQLEDLSNMTSGISTFCSDSGTGTCLIQAFQSTITER
PDVGMETVPIQIYSSEIVIDSSPGFEIVPIIIDAALGNNTVITVIWTTSSSISVEVTGPS
GTLIDENDPRYHIDLSTKIVTVNLPFALPGRWNVTIYSTQGITEHASVAVTSKPSQEEYQ
PVTVTVLLGSREVDLSQTPALAIYARVQQDHHPVLNADVTAIISDANAATTTMSLLDGGS
GSDLFKDDGTYSGFFLGFASNGRYNVKVNVIGYEDVIKVSKNRRRRRSTTVEVGTIEEPS
FMRTASGGVFKVQSYTANLLDTIAPSRIQDLIYESFSYDNSTVTLDWTAVGDDMDHGTAY
SYELRYSTNFSEVRDDFNKSHLVSQEQVLYGNLSHVNASGTTESVTITLPQKGEDIVYYF
GIRAWDEAGNGGDLSNIASLSIRFIPMALPTAVMTTDMTEIITSVDQTESIAPGTSETSS
ENILTSSDTLITTSDNETPTSGLTTEFIHTFPGSQSTPRAETTDVMTEIITTLDKTESIA
PGTIETSSEDIPTSSETLTIENTTPAIETPTSGLTTEFIHTFPGSPSTPRAETTDVMTEI
ITTLDKTESIAPGTIETSSEDIPTSSDTLNTTSDIETTTSGLTTELIHTIPGSQSTPGKE
TTFDITTGTSTTTTNELFSQTSSIPGFSMSSTTDQSTQFTTKSLEKTIYPRVSTSSNQSI
EPKTSSTTDTTDLFSTHKPYTSTPFTTESRPPKLTTSTSPSEIYVTTHQENPETTVSKQP
EPLERTTHQEIPETTVSKQPEPLERTTHQEIPETTVSKQPEPWERTTHQEIPETTVSKQP
EPWERTTHQEIPETTVSKQPEPWERTTHQEAPESTKATEPTGPEAQAVIIGLSCALSAVT
IIAAVSLVYIYNVKQSLNQVKPITPPQSAWAHQGIADVEMAQKEPSYNHPTFKTA
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgcacattacaccggaatatattcttcaagaaatgtaccgagaaaacaaatatggccct
accgacagtgtcttggttcgaaattggggttatcttcgctggggattattcaaagaacat
tatgatcctgatgacgtcagagaggttggcgcccctgcctatgatatacccggtggaggt
actgaaggaacgcgctgttctctcaagatcaagggagaagttttacacgccgacggtcgt
ccgtgtcagaaaacacctaacagcgattacgatccttcttgtagattcgttccaaatact
gcagggcagacagcgaccgcttcgttgctatttggaaccaggaatgctcccgtacattcc
atagaggaattttgtagcgacgacatatcagatcctcacagcttacataaccctctagca
ccaaacttgatgaacaacagatgcaatggggaaagtgcgtggaaggtgatggaacggaca
ggcgacttcaaagctggcatccatcctgtcttgaacaccactccttcttttgaacttctt
cagctatctactgttaggagtgtagtgctagtgcttgatatcagtgggagtatgggggga
aaccggtttgaccgtatgattcaatcatctactgactacatcatgaacgtcattccagaa
ggtagcaagctgggaatcgtcgtcttcgaaagtacctcacaaatcagagcaagtctcacc
gacgtcacagatacaacgtccaggcaatatctagccagtgctttgccaccgtccgcagga
ggatcaacgtgtattggatgtgggatactgtctggcattcaggtccttgggtcatacgca
caaggaggatacatcttacttcttagtgatggcggagagaatatatctccgtacattcga
gacacgtatgacgaaatcgagaactctggggtcataatggataccatcactataagcaac
tcggctgaccaacaattggaagatctttccaacatgacttctggcatctctaccttctgc
tccgatagtggaactggaacgtgtctcattcaggcctttcagagtacgataactgaaaga
ccagatgtcgggatggagaccgtccctatacagatctatagctccgagatcgtaattgat
agctctcctggtttcgagatcgttccgataatcattgacgccgcattgggtaataacaca
gtgatcactgtgatatggaccacgagctcatcgatctcggtcgaagtcactggaccaagc
ggtactctgattgatgaaaacgaccctaggtatcatattgatctcagcacaaagattgtg
acagttaacctaccattcgccctgcccggtaggtggaacgttaccatttacagcactcag
ggaatcactgagcacgcgagtgtagcagtaacatctaaaccaagtcaggaggaatatcaa
ccagttacagtaactgttcttctcggatcaagggaggtggatctttctcagactccagca
ctagcgatctatgctcgggtgcaacaggatcaccatccagttcttaatgctgacgtcacg
gctatcatctcagacgccaatgcagcaacaacgaccatgtcattgctagatggtggttca
ggttcagatttattcaaagacgatggaacatattcgggatttttccttggtttcgcttcc
aatggtagatataacgtcaaggtcaatgtcatcggctatgaagacgtaattaaagtctca
aaaaatcgaagaagaagacgatcaactacagttgaagtcgggaccatagaggagccatct
tttatgcggacagcatctggaggagtctttaaagtccagagctatacagccaacctttta
gataccatcgcgccttctcgtattcaagacttgatctacgagtccttctcatatgacaat
agcacagtaactctggactggacagctgtaggagatgacatggaccacggaactgcatac
agttacgaacttcgctattccaccaacttctccgaggtgcgagacgacttcaacaagagc
catttggtctctcaagaacaagtgctgtacggcaatctatcccacgtcaatgcttcagga
acaacggagagtgtcactattacccttccacagaagggagaggacatcgtttattatttt
ggtattcgagcttgggatgaggccgggaatggaggagacttgtcgaacattgcttcactg
tctatccgtttcataccaatggcattacctaccgcagtgatgactactgatatgacagag
ataatcacttctgtagaccagacagaatcgattgctccaggaaccagcgaaacctcgtca
gaaaacatactaacatcgtcggatactttgattaccacgtcagataatgaaacaccaacc
tcaggtctaacaacagaatttattcatacatttcctggatcacaaagtacacccagagca
gaaacaactgatgtaatgacagagataattactactcttgacaagacagaatcgattgct
ccaggaaccatcgaaacttcgtcagaagacataccaacatcgtcggaaacattgactatt
gagaataccacgccagcaattgaaacaccaacctcaggtctaacaacagaatttattcat
acatttcctggatcaccaagtacacccagagcagaaacgactgacgtaatgacagagata
attactactcttgacaagacagaatcgattgctccaggaaccatcgaaacttcgtcagaa
gacataccaacatcgtcggatacattgaataccacgtcagatattgaaacaacaacctca
ggtctaacaacagaacttattcatacaattcctggatcacaaagtacacccggtaaagaa
acgacttttgatattactactggtacatcgaccacgacaacgaacgagctttttagtcaa
acatcaagcataccagggttctcgatgtcaagcactactgaccaatctacacagttcacg
acaaagagcttagagaagacaatttatccaagagtttctacatcttcgaaccagtccata
gagccaaagacttcaagtactactgacacgactgatctgttttcaacacacaagccttac
acatctactccattcacgactgaatctagaccaccaaaacttacaaccagtacttcgcca
tcagagatatatgtaacaacacatcaagagaatcctgagaccacagtatccaagcaacct
gagcctttggagcgaacaacacatcaagagattcctgagaccacagtatccaagcaacct
gagcctttggagcgaacaacacatcaagagattcctgagaccacagtatccaagcaacct
gagccttgggagcgaacaacacatcaagagattcctgagaccacagtatccaagcaacct
gagccttgggagcgaacaacacatcaagagattcctgagaccacagtatccaagcaacct
gagccttgggagcgaacaacacatcaagaggctcctgaatcaacgaaagccacggaacca
accggaccagaagcacaggctgtaatcattggcctgtcttgcgcactaagtgcagttacc
atcatagcagcagtcagtttggtgtacatctacaatgttaagcagagtctcaatcaggta
aagccgattaccccgcctcaatcggcctgggcacaccaaggaattgcggatgtagagatg
gcacaaaaggaacctagctacaatcatcctactttcaaaacggcttga
DBGET
integrated database retrieval system
