Lytechinus variegatus (green sea urchin): 121416221
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Entry
121416221 CDS
T11173
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121416221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121416221
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121416221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
121416221
NCBI-ProteinID:
XP_041465659
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All DBs
Position
5:complement(42981057..43007276)
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AA seq
555 aa
AA seq
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MNVVLAVKQYVAKMIEESGPGMKVLLMDKETISFVTMVYAQSEILQKEVYLFERLDSANR
EIMKHLRCICFIRPKRENIEMLCNELRNPKYAVYFIYFSNVVSKSDVKLLAEADEQEVVR
EVQEFYGDYIAICPHVFSFNTTGTARGMRWDPPVLNRVCAGLTSVLLSLKKCPMIRYQNS
SEMAKKLAETVRQVISKDAGLFDFKRTDVAPVLLILDRRGDAVTPLLNQWTYEAMVHELL
GIRNKRIDLSDVPGISKDLQEVVLSAEQDEFYSNNLYNNYGEICTKIKELMEEFQKKSQS
QKKIESIADMKAFVENYPQFKKMSGTVAKHVTVVQELSRQVRAYNLLEVSEVEQELACQS
DHNEALKRIRTLLGSDKVRDLDACRLVALYGLRYERHTNNNFVGLMEMLRRRGVSDKHRM
LVKSIIQYGGEKSRGTDLFGQDNPMARTRRFFKGLKDVENIYTQHRPLIYETLDQLFKGK
LKEGAYPYLGSSQLRDRPQDVVVFMIGGITYEECFAIYNLNRATPGIRVIVGGTTVHNFK
SFLEEVSLTGLESPY
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtattggctgtgaagcagtatgttgcgaaaatgatagaggaaagtggtcct
ggcatgaaggtactccttatggacaaagaaacgatcagctttgtaaccatggtgtatgct
cagtctgaaatcctacagaaggaagtctatctgtttgaaagattagactctgcgaacagg
gagatcatgaaacatctacgctgtatatgcttcattcgaccaaagagggagaacattgaa
atgctgtgcaatgagttgagaaatccaaagtatgctgtgtacttcatctacttcagtaat
gttgtcagcaaaagtgatgttaaattgcttgcagaagcagatgaacaagaagtggttcgg
gaagtacaggagttctatggagactacattgccatctgtccccatgtgttttcatttaat
acaactggtacagcaaggggtatgagatgggatcctccagtcttgaaccgtgtttgtgct
ggactcacatctgtgctcctgtcactcaagaaatgtcccatgatcaggtatcagaactca
tcggagatggccaagaaacttgcagaaactgtcaggcaagtgatatccaaagatgcaggt
ttatttgatttcaagagaacagatgttgcaccagtcttgctaatcttagatagaagagga
gatgcagtcacaccgctcctcaaccaatggacatatgaggccatggttcatgagctgctc
gggataaggaacaaacgtattgatctatcagatgttccaggtatctccaaagacttgcag
gaggttgtactttcagctgaacaagatgaattctattctaataatctatataacaactat
ggagagatctgcaccaagatcaaagaactcatggaggaatttcagaagaaatctcagagt
cagaagaaaattgaatcaatagctgacatgaaggcatttgttgagaattaccctcagttc
aagaagatgtctggtacagtagccaaacatgtaacggttgtccaggaactttctagacag
gtcagggcatacaatctcttggaggtgtctgaggtagagcaggagttagcttgtcaatca
gatcacaatgaggctctcaagagaatccggacattacttggaagtgataaggtccgagat
ctggacgcctgccggttagtcgccctctacggtctaagatatgagcgtcacacaaacaat
aactttgttggtctgatggagatgttgagacggagaggagtcagtgataaacatagaatg
cttgtaaagtctatcatccagtatggaggagagaaatcaagaggaaccgatctttttggt
caagataatcctatggcaaggactaggagattctttaaaggattaaaggatgttgagaat
atctacacacagcatcgaccacttatttatgaaacacttgaccagctcttcaagggaaag
ctgaaggaaggagcctatccatatctaggcagcagtcaactcagagatagacctcaagat
gttgttgtattcatgattggtggtatcacatatgaagaatgctttgctatctacaactta
aaccgtgctacaccagggattagagttattgtaggaggtaccacagtacacaactttaaa
agcttcttagaggaagtctcattgacaggcttagagtcaccttactga
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