Lytechinus variegatus (green sea urchin): 121416314
Help
Entry
121416314 CDS
T11173
Name
(RefSeq) homeobox protein orthopedia B-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121416314
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121416314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121416314
NCBI-ProteinID:
XP_041465801
LinkDB
All DBs
Position
5:complement(47043896..47066730)
Genome browser
AA seq
522 aa
AA seq
DB search
MDGAHHPITAMSPPACPVSTGHGMVHDSLPLHPNPIVLARSGKCITGHGGEDAPKVSRPS
HTIDAILGMQQSRSDRFFRPLFTGPNPFAGLLSSRLGPSGEHMLPLNLAVKAEQQHLSGG
KIGIPFHADEGSSNNLKDGDEPEHLDLQHDTENDSMSKRNASMDETVNDHADISKCTPVG
VHDSDVEDLSSRRSMSPLTYLPGRKQALGCSSTSGCNSDGNVVSPRHSGKRSRSPNQSSL
SMMEDDMDEMEADENGEPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVN
LPEVRVQVWFQNRRAKWRRQEKMEASTLKLKDSSLPSISRCVPSSMASSLPLDPWLNPLS
TARQLPALSLPGILHPSLSASVAAAAAMAAAGGSLPPGLTHLSAALPFLAAHQQHQQQQR
QQAAVAAVAAAANQSATAASAFPLLSPTRLTSPLGRSGSQERLNSQESASGESCSGSDLG
GSLGEDQQSSSIVTLRKKAMAHLENIVRNSGGESPPLLSESR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcgcatcatcccatcacggctatgtcaccgccagcctgcccggtgagtacg
ggacacggaatggttcacgacagccttcccctccatccaaatcctattgtgctcgcccgc
tctgggaaatgcatcaccggacacggaggtgaagatgcgcctaaagtatcccgtccgagt
cacaccattgatgcaatacttggaatgcagcagtctagatcggataggttctttcgaccg
ttgttcacggggcccaacccctttgctggtttattgtctagccgtcttggccccagtgga
gaacacatgctacccttaaatctagccgtaaaagcggaacaacaacatttgagtggagga
aaaattgggatcccttttcatgctgatgaaggatcaagcaacaatcttaaagacggtgat
gaacctgagcacctagaccttcaacatgatacagaaaacgattcaatgtccaagagaaat
gcatcgatggatgaaacagtcaacgatcacgctgatatttcaaaatgtacaccagttggg
gttcacgattcggacgtcgaggacttatcgtcccgcagatccatgtctccactaacctat
ctgcccggaagaaaacaagcccttggttgcagttcaacatcgggttgcaacagcgatggc
aacgtcgtcagccctcgacattcgggaaagcgatctcgatcaccgaatcaatcatcgcta
tcgatgatggaagatgacatggacgagatggaggctgatgaaaacggtgaacctaagaag
aagcatcgtcgcaatcgaaccactttcaccacctaccaacttcatgaactggagagggcg
tttgagaaatctcattacccggatgtttacagcagggaggaactggcacttaaggtcaat
ctgccagaggtcagagttcaagtttggtttcagaacagacgagcgaaatggcgtcgtcag
gaaaagatggaagctagtactctcaaattgaaagactcttccctaccaagcatcagtcgg
tgtgtaccatcttcaatggcaagctctttacctctggatccatggcttaaccctttatct
accgctcgacaattaccagccctctccttgcctggtattcttcatccatcgctgtctgct
agtgtcgctgccgctgcagcgatggcggctgccggtggatctcttcccccgggactgacc
catcttagtgccgcattacccttcttagcagcccatcagcaacaccagcagcagcagcgc
cagcaagcagcggtggccgctgtcgctgcagccgccaaccaatcggcgactgctgcgtct
gcatttccgttgctcagtcccactcgtctgacatcgcctctcggccgttctggtagtcag
gagcgcctgaacagccaggaaagtgcaagcggtgagagttgtagcgggagtgatctgggt
ggatcattaggggaagaccaacagagctccagtattgtaacgctacgcaaaaaggcgatg
gcacacctggaaaatatcgtcagaaacagtgggggcgaaagcccccctctcctttctgaa
tcacgctga
DBGET
integrated database retrieval system
